Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
RPL39P62891 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 TMBIM7P-203ENST00000641617 1718 ntBASIC11.53□□□□□ -0.56
RPL39P62891 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
RPL39P62891 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.53□□□□□ -0.56
RPL39P62891 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 ABCD1P5-201ENST00000445663 754 ntBASIC11.53□□□□□ -0.56
RPL39P62891 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 KRT17P6-201ENST00000453795 1220 ntBASIC11.53□□□□□ -0.56
RPL39P62891 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.53□□□□□ -0.56
RPL39P62891 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.53□□□□□ -0.56
RPL39P62891 AC064862.7-201ENST00000604520 867 ntBASIC11.53□□□□□ -0.56
RPL39P62891 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 AC114341.1-201ENST00000618070 349 ntBASIC11.53□□□□□ -0.56
RPL39P62891 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 CICP24-201ENST00000605464 2705 ntBASIC11.53□□□□□ -0.56
RPL39P62891 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
RPL39P62891 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
RPL39P62891 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
RPL39P62891 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
RPL39P62891 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.53□□□□□ -0.56
RPL39P62891 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RPL39P62891 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.52□□□□□ -0.56
RPL39P62891 NCF1C-201ENST00000438382 1427 ntBASIC11.52□□□□□ -0.56
RPL39P62891 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.52□□□□□ -0.56
RPL39P62891 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
RPL39P62891 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RPL39P62891 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
RPL39P62891 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.52□□□□□ -0.56
RPL39P62891 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.52□□□□□ -0.56
RPL39P62891 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RPL39P62891 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.52□□□□□ -0.56
RPL39P62891 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.52□□□□□ -0.56
RPL39P62891 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RPL39P62891 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.52□□□□□ -0.56
RPL39P62891 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
RPL39P62891 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.52□□□□□ -0.57
RPL39P62891 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.57
RPL39P62891 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.52□□□□□ -0.57
RPL39P62891 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.52□□□□□ -0.57
RPL39P62891 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
RPL39P62891 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RPL39P62891 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 PMS2P1-201ENST00000431037 1228 ntBASIC11.52□□□□□ -0.57
RPL39P62891 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.52□□□□□ -0.57
RPL39P62891 AC104076.2-201ENST00000448912 469 ntBASIC11.52□□□□□ -0.57
RPL39P62891 BX005266.1-201ENST00000473402 457 ntBASIC11.52□□□□□ -0.57
RPL39P62891 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.52□□□□□ -0.57
RPL39P62891 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
RPL39P62891 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.52□□□□□ -0.57
RPL39P62891 AL136038.3-201ENST00000561909 1096 ntBASIC11.52□□□□□ -0.57
RPL39P62891 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.52□□□□□ -0.57
RPL39P62891 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.52□□□□□ -0.57
RPL39P62891 AC091167.2-201ENST00000579581 588 ntBASIC11.52□□□□□ -0.57
RPL39P62891 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.52□□□□□ -0.57
RPL39P62891 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.52□□□□□ -0.57
RPL39P62891 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms