Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VSX2P58304 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSX2P58304 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
VSX2P58304 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.56■□□□□ 0.08
VSX2P58304 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSX2P58304 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.56■□□□□ 0.08
VSX2P58304 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.56■□□□□ 0.08
VSX2P58304 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSX2P58304 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.56■□□□□ 0.08
VSX2P58304 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.56■□□□□ 0.08
VSX2P58304 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSX2P58304 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
VSX2P58304 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VSX2P58304 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
VSX2P58304 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VSX2P58304 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.56■□□□□ 0.08
VSX2P58304 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.56■□□□□ 0.08
VSX2P58304 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.55■□□□□ 0.08
VSX2P58304 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.55■□□□□ 0.08
VSX2P58304 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.55■□□□□ 0.08
VSX2P58304 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.55■□□□□ 0.08
VSX2P58304 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.55■□□□□ 0.08
VSX2P58304 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 AC107890.1-201ENST00000422478 521 ntBASIC15.55■□□□□ 0.08
VSX2P58304 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.55■□□□□ 0.08
VSX2P58304 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.55■□□□□ 0.08
VSX2P58304 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 DUX4L27-201ENST00000554796 1261 ntBASIC15.55■□□□□ 0.08
VSX2P58304 AC051619.7-201ENST00000568314 623 ntBASIC15.55■□□□□ 0.08
VSX2P58304 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
VSX2P58304 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
VSX2P58304 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VSX2P58304 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
VSX2P58304 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VSX2P58304 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VSX2P58304 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.54■□□□□ 0.08
VSX2P58304 REXO1L8P-201ENST00000604378 1897 ntBASIC15.54■□□□□ 0.08
VSX2P58304 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.54■□□□□ 0.08
VSX2P58304 AL662844.4-201ENST00000606367 2838 ntBASIC15.54■□□□□ 0.08
VSX2P58304 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VSX2P58304 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
VSX2P58304 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VSX2P58304 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.54■□□□□ 0.08
VSX2P58304 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.54■□□□□ 0.08
VSX2P58304 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.54■□□□□ 0.08
VSX2P58304 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.54■□□□□ 0.08
VSX2P58304 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.54■□□□□ 0.08
VSX2P58304 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
VSX2P58304 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.54■□□□□ 0.08
VSX2P58304 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.54■□□□□ 0.08
VSX2P58304 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.54■□□□□ 0.08
VSX2P58304 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.54■□□□□ 0.08
VSX2P58304 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.54■□□□□ 0.08
VSX2P58304 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VSX2P58304 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.54■□□□□ 0.08
VSX2P58304 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.54■□□□□ 0.08
VSX2P58304 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
VSX2P58304 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VSX2P58304 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms