Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXG1P55316 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
FOXG1P55316 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FOXG1P55316 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
FOXG1P55316 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXG1P55316 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXG1P55316 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXG1P55316 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.19□□□□□ -0.14
FOXG1P55316 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.19□□□□□ -0.14
FOXG1P55316 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXG1P55316 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FOXG1P55316 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXG1P55316 AL158211.3-201ENST00000607385 239 ntBASIC14.19□□□□□ -0.14
FOXG1P55316 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXG1P55316 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
FOXG1P55316 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.19□□□□□ -0.14
FOXG1P55316 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXG1P55316 AL035456.1-201ENST00000456064 1369 ntBASIC14.19□□□□□ -0.14
FOXG1P55316 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
FOXG1P55316 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
FOXG1P55316 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.19□□□□□ -0.14
FOXG1P55316 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXG1P55316 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXG1P55316 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.19□□□□□ -0.14
FOXG1P55316 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
FOXG1P55316 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXG1P55316 MTHFR-217ENST00000641820 1569 ntBASIC14.18□□□□□ -0.14
FOXG1P55316 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXG1P55316 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
FOXG1P55316 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
FOXG1P55316 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
FOXG1P55316 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXG1P55316 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXG1P55316 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXG1P55316 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
FOXG1P55316 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXG1P55316 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXG1P55316 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXG1P55316 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.18□□□□□ -0.14
FOXG1P55316 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.18□□□□□ -0.14
FOXG1P55316 AL079307.3-201ENST00000556114 283 ntBASIC14.18□□□□□ -0.14
FOXG1P55316 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.18□□□□□ -0.14
FOXG1P55316 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXG1P55316 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
FOXG1P55316 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
FOXG1P55316 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXG1P55316 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXG1P55316 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXG1P55316 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXG1P55316 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXG1P55316 AC134407.2-201ENST00000625089 1978 ntBASIC14.18□□□□□ -0.14
FOXG1P55316 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
FOXG1P55316 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXG1P55316 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 CYP4F24P-201ENST00000586049 1580 ntBASIC14.17□□□□□ -0.14
FOXG1P55316 CETN4P-206ENST00000642099 2168 ntBASIC14.17□□□□□ -0.14
FOXG1P55316 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 AL691432.1-201ENST00000596308 1422 ntBASIC14.17□□□□□ -0.14
FOXG1P55316 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXG1P55316 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXG1P55316 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXG1P55316 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms