Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC4P55056 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
APOC4P55056 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 AC245100.5-201ENST00000452108 331 ntBASIC11.88□□□□□ -0.51
APOC4P55056 RN7SL618P-201ENST00000477850 296 ntBASIC11.88□□□□□ -0.51
APOC4P55056 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC4P55056 AL079307.3-201ENST00000556114 283 ntBASIC11.88□□□□□ -0.51
APOC4P55056 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC4P55056 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 AL590560.3-201ENST00000623350 461 ntBASIC11.88□□□□□ -0.51
APOC4P55056 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC4P55056 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC4P55056 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC4P55056 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
APOC4P55056 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC4P55056 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
APOC4P55056 AC087499.5-201ENST00000452760 1342 ntBASIC11.87□□□□□ -0.51
APOC4P55056 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
APOC4P55056 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOC4P55056 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC4P55056 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
APOC4P55056 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
APOC4P55056 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC4P55056 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.87□□□□□ -0.51
APOC4P55056 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.87□□□□□ -0.51
APOC4P55056 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.87□□□□□ -0.51
APOC4P55056 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.87□□□□□ -0.51
APOC4P55056 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC4P55056 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.87□□□□□ -0.51
APOC4P55056 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.87□□□□□ -0.51
APOC4P55056 TEX28P1-201ENST00000613479 1221 ntBASIC11.87□□□□□ -0.51
APOC4P55056 TEX28P2-201ENST00000617764 1221 ntBASIC11.87□□□□□ -0.51
APOC4P55056 MIR6069-201ENST00000620069 79 ntBASIC11.87□□□□□ -0.51
APOC4P55056 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC4P55056 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
APOC4P55056 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
APOC4P55056 AC022144.1-201ENST00000602255 1580 ntBASIC11.87□□□□□ -0.51
APOC4P55056 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
APOC4P55056 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC4P55056 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
APOC4P55056 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOC4P55056 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC11.87□□□□□ -0.51
APOC4P55056 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOC4P55056 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
APOC4P55056 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
APOC4P55056 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
APOC4P55056 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
APOC4P55056 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOC4P55056 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms