Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB3P54753 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHB3P54753 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
EPHB3P54753 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EPHB3P54753 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.86■□□□□ 0.29
EPHB3P54753 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
EPHB3P54753 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHB3P54753 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHB3P54753 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
EPHB3P54753 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
EPHB3P54753 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHB3P54753 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHB3P54753 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHB3P54753 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.86■□□□□ 0.29
EPHB3P54753 AC092337.1-201ENST00000568699 1129 ntBASIC16.86■□□□□ 0.29
EPHB3P54753 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.86■□□□□ 0.29
EPHB3P54753 AC099568.2-201ENST00000609194 695 ntBASIC16.86■□□□□ 0.29
EPHB3P54753 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHB3P54753 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.86■□□□□ 0.29
EPHB3P54753 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.86■□□□□ 0.29
EPHB3P54753 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.86■□□□□ 0.29
EPHB3P54753 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHB3P54753 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB3P54753 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
EPHB3P54753 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHB3P54753 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
EPHB3P54753 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
EPHB3P54753 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHB3P54753 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
EPHB3P54753 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 OR8S1-201ENST00000310194 1080 ntBASIC16.85■□□□□ 0.29
EPHB3P54753 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHB3P54753 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHB3P54753 MYCLP2-201ENST00000449268 967 ntBASIC16.85■□□□□ 0.29
EPHB3P54753 AL589987.1-201ENST00000453380 819 ntBASIC16.85■□□□□ 0.29
EPHB3P54753 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
EPHB3P54753 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.85■□□□□ 0.29
EPHB3P54753 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.85■□□□□ 0.29
EPHB3P54753 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.85■□□□□ 0.29
EPHB3P54753 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
EPHB3P54753 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
EPHB3P54753 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHB3P54753 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 REXO1L8P-201ENST00000604378 1897 ntBASIC16.84■□□□□ 0.29
EPHB3P54753 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHB3P54753 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHB3P54753 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 AC106886.4-201ENST00000623557 2502 ntBASIC16.84■□□□□ 0.29
EPHB3P54753 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.84■□□□□ 0.29
EPHB3P54753 INE1-201ENST00000456273 945 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms