Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SMSP52788 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SMSP52788 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.28■□□□□ 0.04
SMSP52788 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.28■□□□□ 0.04
SMSP52788 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.27■□□□□ 0.04
SMSP52788 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 AL596087.1-201ENST00000400979 1969 ntBASIC15.27■□□□□ 0.04
SMSP52788 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.27■□□□□ 0.04
SMSP52788 AC024909.3-201ENST00000611513 2257 ntBASIC15.27■□□□□ 0.04
SMSP52788 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SMSP52788 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.27■□□□□ 0.04
SMSP52788 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SMSP52788 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.27■□□□□ 0.04
SMSP52788 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 FAM185BP-201ENST00000443595 716 ntBASIC15.27■□□□□ 0.04
SMSP52788 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.27■□□□□ 0.04
SMSP52788 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMSP52788 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.27■□□□□ 0.04
SMSP52788 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.27■□□□□ 0.04
SMSP52788 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.27■□□□□ 0.04
SMSP52788 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.27■□□□□ 0.04
SMSP52788 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.27■□□□□ 0.04
SMSP52788 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.27■□□□□ 0.04
SMSP52788 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.27■□□□□ 0.03
SMSP52788 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMSP52788 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.27■□□□□ 0.03
SMSP52788 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SMSP52788 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SMSP52788 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMSP52788 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMSP52788 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMSP52788 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMSP52788 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMSP52788 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.26■□□□□ 0.03
SMSP52788 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SMSP52788 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.26■□□□□ 0.03
SMSP52788 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SMSP52788 AC068587.6-202ENST00000641839 5619 ntBASIC15.26■□□□□ 0.03
SMSP52788 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 GGT3P-204ENST00000453783 1664 ntBASIC15.26■□□□□ 0.03
SMSP52788 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SMSP52788 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.26■□□□□ 0.03
SMSP52788 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.26■□□□□ 0.03
SMSP52788 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.26■□□□□ 0.03
SMSP52788 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.26■□□□□ 0.03
SMSP52788 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.26■□□□□ 0.03
SMSP52788 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SMSP52788 PAWRP1-201ENST00000451083 565 ntBASIC15.26■□□□□ 0.03
SMSP52788 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.26■□□□□ 0.03
SMSP52788 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.26■□□□□ 0.03
SMSP52788 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.26■□□□□ 0.03
SMSP52788 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 AC022145.2-201ENST00000598203 171 ntBASIC15.26■□□□□ 0.03
SMSP52788 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SMSP52788 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SMSP52788 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms