Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.11■□□□□ 0.33
LHX1P48742 AL512361.1-201ENST00000554200 418 ntBASIC17.11■□□□□ 0.33
LHX1P48742 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.11■□□□□ 0.33
LHX1P48742 AC010336.2-201ENST00000564226 506 ntBASIC17.11■□□□□ 0.33
LHX1P48742 AC009407.1-201ENST00000568958 598 ntBASIC17.11■□□□□ 0.33
LHX1P48742 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.11■□□□□ 0.33
LHX1P48742 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LHX1P48742 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX1P48742 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.11■□□□□ 0.33
LHX1P48742 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX1P48742 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX1P48742 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LHX1P48742 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LHX1P48742 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX1P48742 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX1P48742 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LHX1P48742 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX1P48742 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX1P48742 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
LHX1P48742 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX1P48742 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LHX1P48742 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LHX1P48742 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX1P48742 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX1P48742 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX1P48742 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX1P48742 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 EEF1DP4-201ENST00000446006 880 ntBASIC17.1■□□□□ 0.33
LHX1P48742 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.1■□□□□ 0.33
LHX1P48742 RN7SL204P-201ENST00000582831 262 ntBASIC17.1■□□□□ 0.33
LHX1P48742 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.1■□□□□ 0.33
LHX1P48742 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.1■□□□□ 0.33
LHX1P48742 AC009118.2-201ENST00000613275 655 ntBASIC17.1■□□□□ 0.33
LHX1P48742 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX1P48742 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LHX1P48742 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX1P48742 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LHX1P48742 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX1P48742 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
LHX1P48742 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LHX1P48742 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX1P48742 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LHX1P48742 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LHX1P48742 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX1P48742 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
LHX1P48742 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.09■□□□□ 0.33
LHX1P48742 AC002472.2-201ENST00000442739 958 ntBASIC17.09■□□□□ 0.33
LHX1P48742 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.09■□□□□ 0.33
LHX1P48742 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LHX1P48742 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX1P48742 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 SDHAP3-202ENST00000515467 728 ntBASIC17.09■□□□□ 0.33
LHX1P48742 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.09■□□□□ 0.33
LHX1P48742 LINC02560-201ENST00000596379 459 ntBASIC17.09■□□□□ 0.33
LHX1P48742 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX1P48742 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 KRT8P37-201ENST00000451609 1420 ntBASIC17.09■□□□□ 0.33
LHX1P48742 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX1P48742 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX1P48742 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LHX1P48742 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LHX1P48742 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX1P48742 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX1P48742 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LHX1P48742 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX1P48742 AC092364.2-201ENST00000596710 2692 ntBASIC17.08■□□□□ 0.33
LHX1P48742 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
LHX1P48742 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.08■□□□□ 0.33
LHX1P48742 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX1P48742 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms