Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PCP4P48539 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PCP4P48539 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
PCP4P48539 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
PCP4P48539 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
PCP4P48539 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PCP4P48539 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC10.9□□□□□ -0.67
PCP4P48539 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
PCP4P48539 OS9-202ENST00000315970 2691 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
PCP4P48539 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PCP4P48539 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
PCP4P48539 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.9□□□□□ -0.67
PCP4P48539 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC10.9□□□□□ -0.67
PCP4P48539 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC10.9□□□□□ -0.67
PCP4P48539 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC10.9□□□□□ -0.67
PCP4P48539 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC10.89□□□□□ -0.67
PCP4P48539 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
PCP4P48539 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 PCGF3-213ENST00000620529 1899 ntBASIC10.89□□□□□ -0.67
PCP4P48539 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
PCP4P48539 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC10.89□□□□□ -0.67
PCP4P48539 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC10.89□□□□□ -0.67
PCP4P48539 HECTD3-201ENST00000372168 2530 ntTSL 2 BASIC10.89□□□□□ -0.67
PCP4P48539 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC10.89□□□□□ -0.67
PCP4P48539 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC10.89□□□□□ -0.67
PCP4P48539 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
PCP4P48539 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 MIR2861-201ENST00000636310 90 ntBASIC10.89□□□□□ -0.67
PCP4P48539 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC10.89□□□□□ -0.67
PCP4P48539 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
PCP4P48539 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
PCP4P48539 AC073508.3-201ENST00000619697 1419 ntBASIC10.89□□□□□ -0.67
PCP4P48539 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
PCP4P48539 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
PCP4P48539 AGAP7P-201ENST00000582299 2062 ntBASIC10.89□□□□□ -0.67
PCP4P48539 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC10.89□□□□□ -0.67
PCP4P48539 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
PCP4P48539 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
PCP4P48539 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
PCP4P48539 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 AC027369.3-201ENST00000530465 3707 ntBASIC10.88□□□□□ -0.67
PCP4P48539 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
PCP4P48539 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
PCP4P48539 SEMA4G-205ENST00000517724 2675 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 RAPGEF3-201ENST00000389212 3294 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC10.88□□□□□ -0.67
PCP4P48539 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC10.88□□□□□ -0.67
PCP4P48539 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC10.88□□□□□ -0.67
PCP4P48539 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
PCP4P48539 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
PCP4P48539 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms