Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.33■□□□□ 0.84
COL15A1P39059 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
COL15A1P39059 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC20.33■□□□□ 0.84
COL15A1P39059 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
COL15A1P39059 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.33■□□□□ 0.84
COL15A1P39059 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
COL15A1P39059 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.32■□□□□ 0.84
COL15A1P39059 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.32■□□□□ 0.84
COL15A1P39059 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.32■□□□□ 0.84
COL15A1P39059 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.32■□□□□ 0.84
COL15A1P39059 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.32■□□□□ 0.84
COL15A1P39059 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COL15A1P39059 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 KRT8P37-201ENST00000451609 1420 ntBASIC20.32■□□□□ 0.84
COL15A1P39059 AL691432.1-201ENST00000596308 1422 ntBASIC20.32■□□□□ 0.84
COL15A1P39059 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.32■□□□□ 0.84
COL15A1P39059 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 AC004987.2-201ENST00000395959 1148 ntBASIC20.32■□□□□ 0.84
COL15A1P39059 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
COL15A1P39059 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.32■□□□□ 0.84
COL15A1P39059 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.32■□□□□ 0.84
COL15A1P39059 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.32■□□□□ 0.84
COL15A1P39059 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.32■□□□□ 0.84
COL15A1P39059 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.32■□□□□ 0.84
COL15A1P39059 SLC25A47P1-201ENST00000531577 414 ntBASIC20.32■□□□□ 0.84
COL15A1P39059 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.32■□□□□ 0.84
COL15A1P39059 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.32■□□□□ 0.84
COL15A1P39059 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.32■□□□□ 0.84
COL15A1P39059 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
COL15A1P39059 MIR4538-201ENST00000581377 78 ntBASIC20.32■□□□□ 0.84
COL15A1P39059 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.32■□□□□ 0.84
COL15A1P39059 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.32■□□□□ 0.84
COL15A1P39059 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
COL15A1P39059 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COL15A1P39059 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
COL15A1P39059 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.31■□□□□ 0.84
COL15A1P39059 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COL15A1P39059 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 AC093525.8-201ENST00000624099 1342 ntBASIC20.31■□□□□ 0.84
COL15A1P39059 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.31■□□□□ 0.84
COL15A1P39059 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.31■□□□□ 0.84
COL15A1P39059 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.31■□□□□ 0.84
COL15A1P39059 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC20.31■□□□□ 0.84
COL15A1P39059 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.31■□□□□ 0.84
COL15A1P39059 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.31■□□□□ 0.84
COL15A1P39059 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.31■□□□□ 0.84
COL15A1P39059 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.31■□□□□ 0.84
COL15A1P39059 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL15A1P39059 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.31■□□□□ 0.84
COL15A1P39059 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
COL15A1P39059 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.3■□□□□ 0.84
COL15A1P39059 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL15A1P39059 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL15A1P39059 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL15A1P39059 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL15A1P39059 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.3■□□□□ 0.84
COL15A1P39059 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
COL15A1P39059 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL15A1P39059 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL15A1P39059 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms