Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.15■□□□□ 0.34
CHKAP35790 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHKAP35790 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.15■□□□□ 0.34
CHKAP35790 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.15■□□□□ 0.34
CHKAP35790 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 FAM58DP-201ENST00000428076 619 ntBASIC17.15■□□□□ 0.34
CHKAP35790 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHKAP35790 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.15■□□□□ 0.34
CHKAP35790 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 AL512356.2-201ENST00000546955 174 ntBASIC17.15■□□□□ 0.34
CHKAP35790 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.15■□□□□ 0.34
CHKAP35790 AP001059.3-201ENST00000619053 235 ntBASIC17.15■□□□□ 0.34
CHKAP35790 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CHKAP35790 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.15■□□□□ 0.34
CHKAP35790 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.15■□□□□ 0.34
CHKAP35790 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CHKAP35790 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.15■□□□□ 0.34
CHKAP35790 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.15■□□□□ 0.34
CHKAP35790 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.15■□□□□ 0.34
CHKAP35790 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.15■□□□□ 0.34
CHKAP35790 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.15■□□□□ 0.34
CHKAP35790 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.15■□□□□ 0.34
CHKAP35790 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHKAP35790 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHKAP35790 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.14■□□□□ 0.33
CHKAP35790 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.14■□□□□ 0.33
CHKAP35790 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHKAP35790 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 GGT4P-201ENST00000623672 1708 ntBASIC17.14■□□□□ 0.33
CHKAP35790 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHKAP35790 MIR346-201ENST00000362234 95 ntBASIC17.14■□□□□ 0.33
CHKAP35790 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 RBPMS2P1-201ENST00000437762 623 ntBASIC17.14■□□□□ 0.33
CHKAP35790 FAM86GP-201ENST00000448322 971 ntBASIC17.14■□□□□ 0.33
CHKAP35790 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.14■□□□□ 0.33
CHKAP35790 AC067863.1-201ENST00000494933 530 ntBASIC17.14■□□□□ 0.33
CHKAP35790 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.14■□□□□ 0.33
CHKAP35790 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.14■□□□□ 0.33
CHKAP35790 AC106028.4-201ENST00000614509 607 ntBASIC17.14■□□□□ 0.33
CHKAP35790 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.14■□□□□ 0.33
CHKAP35790 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHKAP35790 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CHKAP35790 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.14■□□□□ 0.33
CHKAP35790 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.14■□□□□ 0.33
CHKAP35790 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CHKAP35790 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.14■□□□□ 0.33
CHKAP35790 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHKAP35790 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHKAP35790 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.13■□□□□ 0.33
CHKAP35790 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.13■□□□□ 0.33
CHKAP35790 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CHKAP35790 AL031731.1-201ENST00000642131 2094 ntBASIC17.13■□□□□ 0.33
CHKAP35790 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHKAP35790 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHKAP35790 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.13■□□□□ 0.33
CHKAP35790 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.13■□□□□ 0.33
CHKAP35790 AP000842.3-202ENST00000569238 1080 ntBASIC17.13■□□□□ 0.33
CHKAP35790 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHKAP35790 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms