Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA11P31270 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HOXA11P31270 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA11P31270 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA11P31270 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
HOXA11P31270 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA11P31270 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HOXA11P31270 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.4■□□□□ 0.38
HOXA11P31270 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.39■□□□□ 0.38
HOXA11P31270 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.39■□□□□ 0.38
HOXA11P31270 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HOXA11P31270 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
HOXA11P31270 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA11P31270 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 AC079328.2-201ENST00000561241 3354 ntBASIC17.39■□□□□ 0.37
HOXA11P31270 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HOXA11P31270 REXO1L1P-202ENST00000608646 1974 ntBASIC17.39■□□□□ 0.37
HOXA11P31270 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
HOXA11P31270 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA11P31270 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HOXA11P31270 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
HOXA11P31270 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA11P31270 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
HOXA11P31270 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA11P31270 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXA11P31270 TIMM17BP1-201ENST00000545713 516 ntBASIC17.39■□□□□ 0.37
HOXA11P31270 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.39■□□□□ 0.37
HOXA11P31270 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.39■□□□□ 0.37
HOXA11P31270 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HOXA11P31270 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.39■□□□□ 0.37
HOXA11P31270 AL391069.4-201ENST00000609583 481 ntBASIC17.39■□□□□ 0.37
HOXA11P31270 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
HOXA11P31270 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 AC007431.3-201ENST00000623221 587 ntBASIC17.39■□□□□ 0.37
HOXA11P31270 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA11P31270 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HOXA11P31270 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.39■□□□□ 0.37
HOXA11P31270 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HOXA11P31270 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 PRORSD1P-202ENST00000563365 2154 ntBASIC17.39■□□□□ 0.37
HOXA11P31270 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HOXA11P31270 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HOXA11P31270 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
HOXA11P31270 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXA11P31270 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA11P31270 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HOXA11P31270 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA11P31270 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 AC098614.1-201ENST00000368528 745 ntBASIC17.38■□□□□ 0.37
HOXA11P31270 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXA11P31270 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXA11P31270 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.38■□□□□ 0.37
HOXA11P31270 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXA11P31270 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXA11P31270 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXA11P31270 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXA11P31270 MIR8072-201ENST00000614241 80 ntBASIC17.38■□□□□ 0.37
HOXA11P31270 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA11P31270 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
HOXA11P31270 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXA11P31270 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HOXA11P31270 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXA11P31270 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HOXA11P31270 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXA11P31270 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA11P31270 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA11P31270 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA11P31270 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA11P31270 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA11P31270 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA11P31270 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA11P31270 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXA11P31270 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA11P31270 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA11P31270 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXA11P31270 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
HOXA11P31270 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms