Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.96□□□□□ -0.18
CD40P25942 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.96□□□□□ -0.18
CD40P25942 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
CD40P25942 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.95□□□□□ -0.18
CD40P25942 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CD40P25942 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CD40P25942 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.95□□□□□ -0.18
CD40P25942 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.95□□□□□ -0.18
CD40P25942 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CD40P25942 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.95□□□□□ -0.18
CD40P25942 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.95□□□□□ -0.18
CD40P25942 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CD40P25942 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.95□□□□□ -0.18
CD40P25942 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CD40P25942 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CD40P25942 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.95□□□□□ -0.18
CD40P25942 AC245100.5-201ENST00000452108 331 ntBASIC13.95□□□□□ -0.18
CD40P25942 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.95□□□□□ -0.18
CD40P25942 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.95□□□□□ -0.18
CD40P25942 ZNF890P-202ENST00000530367 1156 ntBASIC13.95□□□□□ -0.18
CD40P25942 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.95□□□□□ -0.18
CD40P25942 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 AC190387.1-201ENST00000551683 408 ntBASIC13.95□□□□□ -0.18
CD40P25942 AL512361.1-201ENST00000554200 418 ntBASIC13.95□□□□□ -0.18
CD40P25942 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CD40P25942 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.95□□□□□ -0.18
CD40P25942 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.95□□□□□ -0.18
CD40P25942 AC008738.7-201ENST00000609744 511 ntBASIC13.95□□□□□ -0.18
CD40P25942 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CD40P25942 AL033527.5-202ENST00000641632 1098 ntBASIC13.95□□□□□ -0.18
CD40P25942 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CD40P25942 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.95□□□□□ -0.18
CD40P25942 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CD40P25942 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.95□□□□□ -0.18
CD40P25942 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.95□□□□□ -0.18
CD40P25942 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CD40P25942 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40P25942 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40P25942 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CD40P25942 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 BTBD7P1-201ENST00000447253 1453 ntBASIC13.94□□□□□ -0.18
CD40P25942 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD40P25942 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40P25942 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CD40P25942 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40P25942 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.94□□□□□ -0.18
CD40P25942 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40P25942 AL136982.4-201ENST00000437689 1740 ntBASIC13.94□□□□□ -0.18
CD40P25942 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD40P25942 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.94□□□□□ -0.18
CD40P25942 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.94□□□□□ -0.18
CD40P25942 AC010336.2-201ENST00000564226 506 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms