Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MMP11P24347 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MMP11P24347 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MMP11P24347 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP11P24347 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
MMP11P24347 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.42■□□□□ 0.06
MMP11P24347 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.42■□□□□ 0.06
MMP11P24347 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.42■□□□□ 0.06
MMP11P24347 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.42■□□□□ 0.06
MMP11P24347 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.42■□□□□ 0.06
MMP11P24347 MIR4745-201ENST00000577608 62 ntBASIC15.42■□□□□ 0.06
MMP11P24347 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.42■□□□□ 0.06
MMP11P24347 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.42■□□□□ 0.06
MMP11P24347 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP11P24347 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP11P24347 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.42■□□□□ 0.06
MMP11P24347 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP11P24347 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP11P24347 FOXO1B-201ENST00000504678 1527 ntBASIC15.42■□□□□ 0.06
MMP11P24347 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
MMP11P24347 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MMP11P24347 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP11P24347 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.42■□□□□ 0.06
MMP11P24347 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MMP11P24347 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP11P24347 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MMP11P24347 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MMP11P24347 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MMP11P24347 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MMP11P24347 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP11P24347 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
MMP11P24347 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.41■□□□□ 0.06
MMP11P24347 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.41■□□□□ 0.06
MMP11P24347 AC098859.1-201ENST00000502915 1238 ntBASIC15.41■□□□□ 0.06
MMP11P24347 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP11P24347 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.41■□□□□ 0.06
MMP11P24347 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 SPTSSB-204ENST00000617024 1292 ntBASIC15.41■□□□□ 0.06
MMP11P24347 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP11P24347 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MMP11P24347 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MMP11P24347 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP11P24347 PAUPAR-201ENST00000630360 2965 ntBASIC15.41■□□□□ 0.06
MMP11P24347 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.41■□□□□ 0.06
MMP11P24347 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.41■□□□□ 0.06
MMP11P24347 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MMP11P24347 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MMP11P24347 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.4■□□□□ 0.06
MMP11P24347 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MMP11P24347 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
MMP11P24347 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP11P24347 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MMP11P24347 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 FAM220BP-201ENST00000377689 816 ntBASIC15.4■□□□□ 0.06
MMP11P24347 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.4■□□□□ 0.06
MMP11P24347 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.4■□□□□ 0.06
MMP11P24347 AC097493.3-201ENST00000509725 367 ntBASIC15.4■□□□□ 0.06
MMP11P24347 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.4■□□□□ 0.06
MMP11P24347 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MMP11P24347 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.4■□□□□ 0.06
MMP11P24347 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms