Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COL11A1P12107 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.12■□□□□ 0.49
COL11A1P12107 REXO1L6P-201ENST00000603433 1515 ntBASIC18.12■□□□□ 0.49
COL11A1P12107 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL11A1P12107 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL11A1P12107 MIR648-201ENST00000385046 94 ntBASIC18.12■□□□□ 0.49
COL11A1P12107 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.12■□□□□ 0.49
COL11A1P12107 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.12■□□□□ 0.49
COL11A1P12107 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.12■□□□□ 0.49
COL11A1P12107 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.12■□□□□ 0.49
COL11A1P12107 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.12■□□□□ 0.49
COL11A1P12107 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.11■□□□□ 0.49
COL11A1P12107 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.11■□□□□ 0.49
COL11A1P12107 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.11■□□□□ 0.49
COL11A1P12107 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.11■□□□□ 0.49
COL11A1P12107 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
COL11A1P12107 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.11■□□□□ 0.49
COL11A1P12107 AL022328.1-201ENST00000610050 478 ntBASIC18.11■□□□□ 0.49
COL11A1P12107 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL11A1P12107 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.11■□□□□ 0.49
COL11A1P12107 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COL11A1P12107 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.11■□□□□ 0.49
COL11A1P12107 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.11■□□□□ 0.49
COL11A1P12107 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.1■□□□□ 0.49
COL11A1P12107 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL11A1P12107 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.1■□□□□ 0.49
COL11A1P12107 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COL11A1P12107 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 RNU1-114P-201ENST00000365297 166 ntBASIC18.1■□□□□ 0.49
COL11A1P12107 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.1■□□□□ 0.49
COL11A1P12107 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
COL11A1P12107 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL11A1P12107 AL606495.2-201ENST00000605867 535 ntBASIC18.1■□□□□ 0.49
COL11A1P12107 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 AC018892.3-201ENST00000623986 2499 ntBASIC18.1■□□□□ 0.49
COL11A1P12107 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.1■□□□□ 0.49
COL11A1P12107 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL11A1P12107 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
COL11A1P12107 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL11A1P12107 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COL11A1P12107 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
COL11A1P12107 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.09■□□□□ 0.49
COL11A1P12107 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
COL11A1P12107 RPL7P3-201ENST00000441388 714 ntBASIC18.09■□□□□ 0.49
COL11A1P12107 RPL13AP25-201ENST00000484130 612 ntBASIC18.09■□□□□ 0.49
COL11A1P12107 AC092658.1-201ENST00000505836 891 ntBASIC18.09■□□□□ 0.49
COL11A1P12107 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.09■□□□□ 0.49
COL11A1P12107 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL11A1P12107 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.09■□□□□ 0.49
COL11A1P12107 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COL11A1P12107 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
COL11A1P12107 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.09■□□□□ 0.49
COL11A1P12107 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL11A1P12107 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COL11A1P12107 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.09■□□□□ 0.49
COL11A1P12107 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.09■□□□□ 0.49
COL11A1P12107 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.09■□□□□ 0.49
COL11A1P12107 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.09■□□□□ 0.49
COL11A1P12107 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.09■□□□□ 0.49
COL11A1P12107 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL11A1P12107 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms