Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM1P09493 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM1P09493 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
TPM1P09493 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM1P09493 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM1P09493 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.96■□□□□ 0.47
TPM1P09493 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM1P09493 SLC25A6P2-201ENST00000497974 877 ntBASIC17.96■□□□□ 0.47
TPM1P09493 AC092119.3-201ENST00000612618 583 ntBASIC17.96■□□□□ 0.47
TPM1P09493 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.96■□□□□ 0.47
TPM1P09493 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.96■□□□□ 0.47
TPM1P09493 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.96■□□□□ 0.47
TPM1P09493 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TPM1P09493 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TPM1P09493 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM1P09493 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC17.96■□□□□ 0.47
TPM1P09493 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TPM1P09493 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM1P09493 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TPM1P09493 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
TPM1P09493 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
TPM1P09493 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.46
TPM1P09493 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TPM1P09493 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.95■□□□□ 0.46
TPM1P09493 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TPM1P09493 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM1P09493 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.95■□□□□ 0.46
TPM1P09493 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TPM1P09493 AL592424.1-201ENST00000563624 1536 ntBASIC17.95■□□□□ 0.46
TPM1P09493 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.95■□□□□ 0.46
TPM1P09493 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM1P09493 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM1P09493 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TPM1P09493 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.95■□□□□ 0.46
TPM1P09493 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.95■□□□□ 0.46
TPM1P09493 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
TPM1P09493 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM1P09493 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM1P09493 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM1P09493 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TPM1P09493 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM1P09493 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM1P09493 AC129492.6-201ENST00000611383 1305 ntBASIC17.95■□□□□ 0.46
TPM1P09493 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM1P09493 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM1P09493 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM1P09493 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM1P09493 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.94■□□□□ 0.46
TPM1P09493 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.94■□□□□ 0.46
TPM1P09493 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.94■□□□□ 0.46
TPM1P09493 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM1P09493 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 ATP5G2P1-201ENST00000433580 426 ntBASIC17.94■□□□□ 0.46
TPM1P09493 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TPM1P09493 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.94■□□□□ 0.46
TPM1P09493 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM1P09493 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM1P09493 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.94■□□□□ 0.46
TPM1P09493 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms