Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.96□□□□□ -0.01
THBS1P07996 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
THBS1P07996 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.96□□□□□ -0.01
THBS1P07996 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.96□□□□□ -0.01
THBS1P07996 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
THBS1P07996 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.96□□□□□ -0.01
THBS1P07996 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.96□□□□□ -0.01
THBS1P07996 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
THBS1P07996 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.96□□□□□ -0.02
THBS1P07996 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
THBS1P07996 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.96□□□□□ -0.02
THBS1P07996 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.96□□□□□ -0.02
THBS1P07996 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
THBS1P07996 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
THBS1P07996 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.95□□□□□ -0.02
THBS1P07996 AKAP8P1-201ENST00000434743 1349 ntBASIC14.95□□□□□ -0.02
THBS1P07996 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
THBS1P07996 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
THBS1P07996 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.95□□□□□ -0.02
THBS1P07996 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
THBS1P07996 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.95□□□□□ -0.02
THBS1P07996 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS1P07996 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 AC105233.2-201ENST00000523697 349 ntBASIC14.95□□□□□ -0.02
THBS1P07996 AF228730.5-201ENST00000530288 346 ntBASIC14.95□□□□□ -0.02
THBS1P07996 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS1P07996 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.95□□□□□ -0.02
THBS1P07996 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.95□□□□□ -0.02
THBS1P07996 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.95□□□□□ -0.02
THBS1P07996 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.95□□□□□ -0.02
THBS1P07996 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.95□□□□□ -0.02
THBS1P07996 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.95□□□□□ -0.02
THBS1P07996 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS1P07996 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.95□□□□□ -0.02
THBS1P07996 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS1P07996 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
THBS1P07996 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS1P07996 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
THBS1P07996 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS1P07996 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
THBS1P07996 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.95□□□□□ -0.02
THBS1P07996 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
THBS1P07996 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.94□□□□□ -0.02
THBS1P07996 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
THBS1P07996 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.94□□□□□ -0.02
THBS1P07996 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
THBS1P07996 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.94□□□□□ -0.02
THBS1P07996 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
THBS1P07996 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 AC112482.1-201ENST00000492080 688 ntBASIC14.94□□□□□ -0.02
THBS1P07996 AC098859.1-201ENST00000502915 1238 ntBASIC14.94□□□□□ -0.02
THBS1P07996 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.94□□□□□ -0.02
THBS1P07996 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.94□□□□□ -0.02
THBS1P07996 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 AC092865.6-201ENST00000642101 219 ntBASIC14.94□□□□□ -0.02
THBS1P07996 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
THBS1P07996 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
THBS1P07996 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
THBS1P07996 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
THBS1P07996 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
THBS1P07996 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
THBS1P07996 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
THBS1P07996 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms