Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TPM3P06753 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TPM3P06753 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TPM3P06753 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TPM3P06753 CICP13-201ENST00000422015 2789 ntBASIC18.27■□□□□ 0.52
TPM3P06753 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.27■□□□□ 0.52
TPM3P06753 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.27■□□□□ 0.52
TPM3P06753 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
TPM3P06753 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TPM3P06753 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TPM3P06753 AL031133.1-201ENST00000406807 723 ntBASIC18.27■□□□□ 0.52
TPM3P06753 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
TPM3P06753 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TPM3P06753 PAWRP1-201ENST00000451083 565 ntBASIC18.27■□□□□ 0.52
TPM3P06753 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.27■□□□□ 0.52
TPM3P06753 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.27■□□□□ 0.52
TPM3P06753 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.27■□□□□ 0.52
TPM3P06753 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.27■□□□□ 0.52
TPM3P06753 AL139424.1-201ENST00000607572 797 ntBASIC18.27■□□□□ 0.52
TPM3P06753 AP001350.2-201ENST00000625104 1094 ntBASIC18.27■□□□□ 0.52
TPM3P06753 PGM5P2-202ENST00000637225 1043 ntBASIC18.27■□□□□ 0.52
TPM3P06753 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
TPM3P06753 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TPM3P06753 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.27■□□□□ 0.51
TPM3P06753 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
TPM3P06753 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TPM3P06753 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 SBF1P1-201ENST00000444527 5631 ntBASIC18.26■□□□□ 0.51
TPM3P06753 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TPM3P06753 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.26■□□□□ 0.51
TPM3P06753 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TPM3P06753 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 MIR5100-201ENST00000579544 119 ntBASIC18.26■□□□□ 0.51
TPM3P06753 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.26■□□□□ 0.51
TPM3P06753 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 AC020765.3-201ENST00000613051 740 ntBASIC18.26■□□□□ 0.51
TPM3P06753 AL589182.2-201ENST00000619332 1049 ntBASIC18.26■□□□□ 0.51
TPM3P06753 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.26■□□□□ 0.51
TPM3P06753 AF228730.7-201ENST00000641842 219 ntBASIC18.26■□□□□ 0.51
TPM3P06753 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TPM3P06753 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TPM3P06753 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 CICP24-201ENST00000605464 2705 ntBASIC18.26■□□□□ 0.51
TPM3P06753 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TPM3P06753 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TPM3P06753 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.26■□□□□ 0.51
TPM3P06753 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TPM3P06753 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM3P06753 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TPM3P06753 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM3P06753 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TPM3P06753 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 AP005117.1-201ENST00000584346 1413 ntBASIC18.25■□□□□ 0.51
TPM3P06753 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM3P06753 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TPM3P06753 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM3P06753 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.25■□□□□ 0.51
TPM3P06753 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TPM3P06753 AP002383.4-201ENST00000442518 975 ntBASIC18.25■□□□□ 0.51
TPM3P06753 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.25■□□□□ 0.51
TPM3P06753 AC012615.1-201ENST00000565797 1299 ntBASIC18.25■□□□□ 0.51
TPM3P06753 RN7SL850P-201ENST00000579959 291 ntBASIC18.25■□□□□ 0.51
TPM3P06753 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TPM3P06753 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.25■□□□□ 0.51
TPM3P06753 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC18.25■□□□□ 0.51
TPM3P06753 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TPM3P06753 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TPM3P06753 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms