Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 PCDHA3-202ENST00000532566 4594 ntBASIC14.67□□□□□ -0.06
HLA-DPB1P04440 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 HNRNPDP1-201ENST00000439535 754 ntBASIC14.67□□□□□ -0.06
HLA-DPB1P04440 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 AF186996.4-201ENST00000467186 377 ntBASIC14.67□□□□□ -0.06
HLA-DPB1P04440 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 OR7E14P-202ENST00000530490 1290 ntBASIC14.67□□□□□ -0.06
HLA-DPB1P04440 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 AC104692.2-201ENST00000603054 253 ntBASIC14.67□□□□□ -0.06
HLA-DPB1P04440 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.67□□□□□ -0.06
HLA-DPB1P04440 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPB1P04440 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 AC016027.1-202ENST00000607927 1699 ntBASIC14.66□□□□□ -0.06
HLA-DPB1P04440 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 KRT18P67-201ENST00000432816 1264 ntBASIC14.66□□□□□ -0.06
HLA-DPB1P04440 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 AP002469.2-201ENST00000531724 424 ntBASIC14.66□□□□□ -0.06
HLA-DPB1P04440 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 AL160237.2-201ENST00000556165 472 ntBASIC14.66□□□□□ -0.06
HLA-DPB1P04440 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 AL353135.1-201ENST00000606729 504 ntBASIC14.66□□□□□ -0.06
HLA-DPB1P04440 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPB1P04440 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPB1P04440 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms