Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC9.89□□□□□ -0.83
APOBP04114 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC9.89□□□□□ -0.83
APOBP04114 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
APOBP04114 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC9.89□□□□□ -0.83
APOBP04114 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC9.89□□□□□ -0.83
APOBP04114 MAGEA5-201ENST00000446757 942 ntBASIC9.89□□□□□ -0.83
APOBP04114 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC9.89□□□□□ -0.83
APOBP04114 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC9.89□□□□□ -0.83
APOBP04114 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
APOBP04114 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 VILL-207ENST00000465644 1857 ntTSL 5 BASIC9.89□□□□□ -0.83
APOBP04114 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
APOBP04114 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
APOBP04114 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC9.89□□□□□ -0.83
APOBP04114 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
APOBP04114 KLK11-210ENST00000600362 759 ntTSL 3 BASIC9.89□□□□□ -0.83
APOBP04114 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 GATB-213ENST00000515812 1893 ntTSL 5 BASIC9.88□□□□□ -0.83
APOBP04114 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
APOBP04114 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
APOBP04114 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
APOBP04114 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
APOBP04114 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC9.88□□□□□ -0.83
APOBP04114 AC023310.1-201ENST00000554836 735 ntBASIC9.88□□□□□ -0.83
APOBP04114 ETV2-208ENST00000621247 941 ntTSL 5 BASIC9.88□□□□□ -0.83
APOBP04114 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
APOBP04114 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC9.88□□□□□ -0.83
APOBP04114 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC9.88□□□□□ -0.83
APOBP04114 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 WT1-AS_6.1-201ENST00000614919 121 ntBASIC9.88□□□□□ -0.83
APOBP04114 TUBB8P12-201ENST00000308911 1335 ntBASIC9.88□□□□□ -0.83
APOBP04114 TUBB7P-202ENST00000428444 1305 ntBASIC9.88□□□□□ -0.83
APOBP04114 TUBB8P7-204ENST00000567960 1332 ntBASIC9.88□□□□□ -0.83
APOBP04114 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC9.88□□□□□ -0.83
APOBP04114 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC9.88□□□□□ -0.83
APOBP04114 AC060834.1-201ENST00000443027 2032 ntBASIC9.88□□□□□ -0.83
APOBP04114 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC9.88□□□□□ -0.83
APOBP04114 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC9.88□□□□□ -0.83
APOBP04114 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
APOBP04114 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
APOBP04114 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC9.88□□□□□ -0.83
APOBP04114 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC9.88□□□□□ -0.83
APOBP04114 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC9.88□□□□□ -0.83
APOBP04114 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 MSRA-203ENST00000441698 788 ntTSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 KRT18P43-201ENST00000469825 1281 ntBASIC9.88□□□□□ -0.83
APOBP04114 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC9.88□□□□□ -0.83
APOBP04114 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 CU633904.3-201ENST00000624042 1029 ntBASIC9.88□□□□□ -0.83
APOBP04114 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
APOBP04114 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC9.88□□□□□ -0.83
APOBP04114 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
APOBP04114 ZBTB45P2-201ENST00000452245 1531 ntBASIC9.87□□□□□ -0.83
APOBP04114 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
APOBP04114 CNN2P10-201ENST00000443067 918 ntBASIC9.87□□□□□ -0.83
APOBP04114 AC024681.1-201ENST00000521917 487 ntBASIC9.87□□□□□ -0.83
APOBP04114 AC134698.3-201ENST00000523880 214 ntBASIC9.87□□□□□ -0.83
APOBP04114 AC009486.1-201ENST00000569860 813 ntBASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms