Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.24■□□□□ 0.03
PDGFAP04085 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.24■□□□□ 0.03
PDGFAP04085 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.24■□□□□ 0.03
PDGFAP04085 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PDGFAP04085 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PDGFAP04085 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PDGFAP04085 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
PDGFAP04085 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.23■□□□□ 0.03
PDGFAP04085 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 AC132872.4-202ENST00000622924 2756 ntBASIC15.23■□□□□ 0.03
PDGFAP04085 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PDGFAP04085 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFAP04085 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.23■□□□□ 0.03
PDGFAP04085 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFAP04085 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFAP04085 KRT17P7-201ENST00000451704 1104 ntBASIC15.23■□□□□ 0.03
PDGFAP04085 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFAP04085 TP53TG3HP-202ENST00000569755 579 ntBASIC15.23■□□□□ 0.03
PDGFAP04085 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.23■□□□□ 0.03
PDGFAP04085 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.23■□□□□ 0.03
PDGFAP04085 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.23■□□□□ 0.03
PDGFAP04085 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.23■□□□□ 0.03
PDGFAP04085 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.23■□□□□ 0.03
PDGFAP04085 AL844908.2-201ENST00000609461 460 ntBASIC15.23■□□□□ 0.03
PDGFAP04085 TEX28P1-201ENST00000613479 1221 ntBASIC15.23■□□□□ 0.03
PDGFAP04085 TEX28P2-201ENST00000617764 1221 ntBASIC15.23■□□□□ 0.03
PDGFAP04085 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFAP04085 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.23■□□□□ 0.03
PDGFAP04085 CU639417.3-201ENST00000624240 1404 ntBASIC15.23■□□□□ 0.03
PDGFAP04085 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFAP04085 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 AC093525.9-201ENST00000624961 1746 ntBASIC15.23■□□□□ 0.03
PDGFAP04085 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PDGFAP04085 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.23■□□□□ 0.03
PDGFAP04085 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDGFAP04085 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.23■□□□□ 0.03
PDGFAP04085 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.22■□□□□ 0.03
PDGFAP04085 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PDGFAP04085 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PDGFAP04085 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFAP04085 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
PDGFAP04085 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFAP04085 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFAP04085 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PDGFAP04085 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.22■□□□□ 0.03
PDGFAP04085 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
PDGFAP04085 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFAP04085 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.22■□□□□ 0.03
PDGFAP04085 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.22■□□□□ 0.03
PDGFAP04085 ATP5G2P4-201ENST00000442175 420 ntBASIC15.22■□□□□ 0.03
PDGFAP04085 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFAP04085 SERPINA7P1-201ENST00000443077 631 ntBASIC15.22■□□□□ 0.03
PDGFAP04085 KRT18P34-201ENST00000488218 1270 ntBASIC15.22■□□□□ 0.03
PDGFAP04085 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.22■□□□□ 0.03
PDGFAP04085 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.22■□□□□ 0.03
PDGFAP04085 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC15.22■□□□□ 0.03
PDGFAP04085 MIR4492-201ENST00000581627 80 ntBASIC15.22■□□□□ 0.03
PDGFAP04085 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PDGFAP04085 AL132655.2-201ENST00000596276 594 ntBASIC15.22■□□□□ 0.03
PDGFAP04085 AC021097.1-201ENST00000607902 574 ntBASIC15.22■□□□□ 0.03
PDGFAP04085 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.22■□□□□ 0.03
PDGFAP04085 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.22■□□□□ 0.03
PDGFAP04085 MIR6752-201ENST00000618442 71 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms