Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 REXO1L3P-201ENST00000622202 1288 ntBASIC14.05□□□□□ -0.16
HLA-DQB1P01920 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DQB1P01920 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 BEND3P1-201ENST00000421591 1944 ntBASIC14.04□□□□□ -0.16
HLA-DQB1P01920 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AL031133.1-201ENST00000406807 723 ntBASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 DRAXINP1-201ENST00000437611 948 ntBASIC14.04□□□□□ -0.16
HLA-DQB1P01920 PAWRP1-201ENST00000451083 565 ntBASIC14.04□□□□□ -0.16
HLA-DQB1P01920 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 MINOS1P3-201ENST00000457048 203 ntBASIC14.04□□□□□ -0.16
HLA-DQB1P01920 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AC091167.2-201ENST00000579581 588 ntBASIC14.04□□□□□ -0.16
HLA-DQB1P01920 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 CYP2A7P1-201ENST00000595391 815 ntBASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AC020765.3-201ENST00000613051 740 ntBASIC14.04□□□□□ -0.16
HLA-DQB1P01920 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 KRT18P1-202ENST00000452408 1331 ntBASIC14.04□□□□□ -0.16
HLA-DQB1P01920 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 AC005622.1-201ENST00000636801 1703 ntBASIC14.04□□□□□ -0.16
HLA-DQB1P01920 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DQB1P01920 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HLA-DQB1P01920 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms