Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.65■□□□□ 0.58
MBD3O95983 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MBD3O95983 NUS1P2-201ENST00000417358 873 ntBASIC18.65■□□□□ 0.58
MBD3O95983 AC106795.1-205ENST00000512851 1056 ntBASIC18.65■□□□□ 0.58
MBD3O95983 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.65■□□□□ 0.58
MBD3O95983 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.65■□□□□ 0.58
MBD3O95983 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.65■□□□□ 0.58
MBD3O95983 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.65■□□□□ 0.58
MBD3O95983 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.65■□□□□ 0.58
MBD3O95983 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MBD3O95983 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MBD3O95983 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.65■□□□□ 0.58
MBD3O95983 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD3O95983 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.65■□□□□ 0.58
MBD3O95983 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.65■□□□□ 0.58
MBD3O95983 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.65■□□□□ 0.58
MBD3O95983 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
MBD3O95983 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
MBD3O95983 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.64■□□□□ 0.58
MBD3O95983 AC106881.1-201ENST00000605849 3329 ntBASIC18.64■□□□□ 0.58
MBD3O95983 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
MBD3O95983 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.64■□□□□ 0.58
MBD3O95983 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MBD3O95983 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.64■□□□□ 0.57
MBD3O95983 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 RCN1P1-201ENST00000400413 996 ntBASIC18.64■□□□□ 0.57
MBD3O95983 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.64■□□□□ 0.57
MBD3O95983 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.64■□□□□ 0.57
MBD3O95983 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.64■□□□□ 0.57
MBD3O95983 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.64■□□□□ 0.57
MBD3O95983 AC012615.1-201ENST00000565797 1299 ntBASIC18.64■□□□□ 0.57
MBD3O95983 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.64■□□□□ 0.57
MBD3O95983 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.64■□□□□ 0.57
MBD3O95983 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.64■□□□□ 0.57
MBD3O95983 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 AC099336.1-202ENST00000602961 463 ntBASIC18.64■□□□□ 0.57
MBD3O95983 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.64■□□□□ 0.57
MBD3O95983 AC129492.6-201ENST00000611383 1305 ntBASIC18.64■□□□□ 0.57
MBD3O95983 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.64■□□□□ 0.57
MBD3O95983 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.64■□□□□ 0.57
MBD3O95983 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MBD3O95983 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MBD3O95983 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
MBD3O95983 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MBD3O95983 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.63■□□□□ 0.57
MBD3O95983 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MBD3O95983 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MBD3O95983 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MBD3O95983 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
MBD3O95983 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.63■□□□□ 0.57
MBD3O95983 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.63■□□□□ 0.57
MBD3O95983 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.63■□□□□ 0.57
MBD3O95983 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MBD3O95983 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.63■□□□□ 0.57
MBD3O95983 AC023908.3-201ENST00000564211 3047 ntBASIC18.63■□□□□ 0.57
MBD3O95983 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MBD3O95983 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.63■□□□□ 0.57
MBD3O95983 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.63■□□□□ 0.57
MBD3O95983 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MBD3O95983 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.63■□□□□ 0.57
MBD3O95983 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.63■□□□□ 0.57
MBD3O95983 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms