Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.15■□□□□ 0.5
GGPS1O95749 SDHAP3-202ENST00000515467 728 ntBASIC18.15■□□□□ 0.5
GGPS1O95749 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
GGPS1O95749 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
GGPS1O95749 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.15■□□□□ 0.5
GGPS1O95749 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.15■□□□□ 0.5
GGPS1O95749 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.15■□□□□ 0.5
GGPS1O95749 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
GGPS1O95749 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.15■□□□□ 0.5
GGPS1O95749 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.15■□□□□ 0.5
GGPS1O95749 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.15■□□□□ 0.5
GGPS1O95749 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.15■□□□□ 0.5
GGPS1O95749 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
GGPS1O95749 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
GGPS1O95749 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
GGPS1O95749 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GGPS1O95749 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.14■□□□□ 0.49
GGPS1O95749 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.14■□□□□ 0.49
GGPS1O95749 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.14■□□□□ 0.49
GGPS1O95749 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.14■□□□□ 0.49
GGPS1O95749 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
GGPS1O95749 COX5BP8-201ENST00000416911 349 ntBASIC18.14■□□□□ 0.49
GGPS1O95749 NME2P1-201ENST00000426182 414 ntBASIC18.14■□□□□ 0.49
GGPS1O95749 DFFBP1-201ENST00000433250 979 ntBASIC18.14■□□□□ 0.49
GGPS1O95749 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.14■□□□□ 0.49
GGPS1O95749 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.14■□□□□ 0.49
GGPS1O95749 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.14■□□□□ 0.49
GGPS1O95749 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.14■□□□□ 0.49
GGPS1O95749 AC140912.1-201ENST00000577171 1054 ntBASIC18.14■□□□□ 0.49
GGPS1O95749 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
GGPS1O95749 AC004461.2-201ENST00000629517 803 ntBASIC18.14■□□□□ 0.49
GGPS1O95749 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
GGPS1O95749 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.14■□□□□ 0.49
GGPS1O95749 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
GGPS1O95749 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
GGPS1O95749 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.14■□□□□ 0.49
GGPS1O95749 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GGPS1O95749 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.13■□□□□ 0.49
GGPS1O95749 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.13■□□□□ 0.49
GGPS1O95749 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 AC005052.1-201ENST00000625181 2492 ntBASIC18.13■□□□□ 0.49
GGPS1O95749 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
GGPS1O95749 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.13■□□□□ 0.49
GGPS1O95749 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GGPS1O95749 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.13■□□□□ 0.49
GGPS1O95749 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.13■□□□□ 0.49
GGPS1O95749 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.13■□□□□ 0.49
GGPS1O95749 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.13■□□□□ 0.49
GGPS1O95749 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.13■□□□□ 0.49
GGPS1O95749 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.13■□□□□ 0.49
GGPS1O95749 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.13■□□□□ 0.49
GGPS1O95749 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.13■□□□□ 0.49
GGPS1O95749 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.13■□□□□ 0.49
GGPS1O95749 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.13■□□□□ 0.49
GGPS1O95749 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
GGPS1O95749 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
GGPS1O95749 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 AL592424.1-201ENST00000563624 1536 ntBASIC18.13■□□□□ 0.49
GGPS1O95749 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GGPS1O95749 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GGPS1O95749 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GGPS1O95749 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GGPS1O95749 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GGPS1O95749 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GGPS1O95749 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GGPS1O95749 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms