Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.96■□□□□ 0.31
BEST1O76090 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
BEST1O76090 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
BEST1O76090 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.96■□□□□ 0.31
BEST1O76090 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 CYP2T1P-202ENST00000641596 2535 ntBASIC16.96■□□□□ 0.31
BEST1O76090 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 PKD1P1-201ENST00000458669 6805 ntBASIC16.96■□□□□ 0.31
BEST1O76090 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.96■□□□□ 0.31
BEST1O76090 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.96■□□□□ 0.31
BEST1O76090 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.96■□□□□ 0.31
BEST1O76090 HAUS4P1-201ENST00000406739 1145 ntBASIC16.96■□□□□ 0.31
BEST1O76090 HIST3H2BA-201ENST00000436555 524 ntBASIC16.96■□□□□ 0.31
BEST1O76090 AC009477.1-201ENST00000452936 217 ntBASIC16.96■□□□□ 0.31
BEST1O76090 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.96■□□□□ 0.31
BEST1O76090 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.96■□□□□ 0.31
BEST1O76090 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.96■□□□□ 0.31
BEST1O76090 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.96■□□□□ 0.31
BEST1O76090 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.96■□□□□ 0.31
BEST1O76090 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
BEST1O76090 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.96■□□□□ 0.31
BEST1O76090 AJ011932.1-201ENST00000621707 465 ntBASIC16.96■□□□□ 0.31
BEST1O76090 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
BEST1O76090 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
BEST1O76090 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.96■□□□□ 0.3
BEST1O76090 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BEST1O76090 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BEST1O76090 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
BEST1O76090 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
BEST1O76090 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.95■□□□□ 0.3
BEST1O76090 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.95■□□□□ 0.3
BEST1O76090 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.95■□□□□ 0.3
BEST1O76090 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
BEST1O76090 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 AC004987.2-201ENST00000395959 1148 ntBASIC16.95■□□□□ 0.3
BEST1O76090 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.95■□□□□ 0.3
BEST1O76090 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.95■□□□□ 0.3
BEST1O76090 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.95■□□□□ 0.3
BEST1O76090 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.95■□□□□ 0.3
BEST1O76090 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.95■□□□□ 0.3
BEST1O76090 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.95■□□□□ 0.3
BEST1O76090 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.95■□□□□ 0.3
BEST1O76090 AC010336.2-201ENST00000564226 506 ntBASIC16.95■□□□□ 0.3
BEST1O76090 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.95■□□□□ 0.3
BEST1O76090 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.95■□□□□ 0.3
BEST1O76090 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BEST1O76090 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
BEST1O76090 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BEST1O76090 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.94■□□□□ 0.3
BEST1O76090 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
BEST1O76090 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BEST1O76090 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.94■□□□□ 0.3
BEST1O76090 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.94■□□□□ 0.3
BEST1O76090 FAM8A3P-201ENST00000427218 844 ntBASIC16.94■□□□□ 0.3
BEST1O76090 AL512638.1-201ENST00000457493 794 ntBASIC16.94■□□□□ 0.3
BEST1O76090 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
BEST1O76090 AC243562.2-201ENST00000561247 970 ntBASIC16.94■□□□□ 0.3
BEST1O76090 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BEST1O76090 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.94■□□□□ 0.3
BEST1O76090 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
BEST1O76090 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BEST1O76090 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms