Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
USH2AO75445 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
USH2AO75445 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
USH2AO75445 SLC25A1P3-201ENST00000395415 828 ntBASIC7.09□□□□□ -1.28
USH2AO75445 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
USH2AO75445 C2orf69P1-201ENST00000563532 1093 ntBASIC7.09□□□□□ -1.28
USH2AO75445 AC105137.3-201ENST00000617588 984 ntBASIC7.09□□□□□ -1.28
USH2AO75445 AC133963.1-201ENST00000504166 1679 ntBASIC7.09□□□□□ -1.28
USH2AO75445 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
USH2AO75445 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
USH2AO75445 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
USH2AO75445 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
USH2AO75445 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
USH2AO75445 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC7.09□□□□□ -1.28
USH2AO75445 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC7.09□□□□□ -1.28
USH2AO75445 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC7.08□□□□□ -1.28
USH2AO75445 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
USH2AO75445 MIR1202-201ENST00000408529 83 ntBASIC7.08□□□□□ -1.28
USH2AO75445 RPL13AP25-201ENST00000484130 612 ntBASIC7.08□□□□□ -1.28
USH2AO75445 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 MIR4649-201ENST00000582839 64 ntBASIC7.08□□□□□ -1.28
USH2AO75445 AC093813.1-201ENST00000605066 256 ntBASIC7.08□□□□□ -1.28
USH2AO75445 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC7.08□□□□□ -1.28
USH2AO75445 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 AC093525.9-201ENST00000624961 1746 ntBASIC7.08□□□□□ -1.28
USH2AO75445 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 ELP6-209ENST00000446787 894 ntTSL 3 BASIC7.08□□□□□ -1.28
USH2AO75445 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
USH2AO75445 AC022748.3-201ENST00000621828 275 ntBASIC7.08□□□□□ -1.28
USH2AO75445 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
USH2AO75445 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
USH2AO75445 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 MRPL37P1-201ENST00000592451 1337 ntBASIC7.08□□□□□ -1.28
USH2AO75445 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
USH2AO75445 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC7.08□□□□□ -1.28
USH2AO75445 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
USH2AO75445 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 AL161773.1-201ENST00000624845 863 ntBASIC7.08□□□□□ -1.28
USH2AO75445 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC7.08□□□□□ -1.28
USH2AO75445 AC139713.2-201ENST00000641328 2723 ntBASIC7.08□□□□□ -1.28
USH2AO75445 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
USH2AO75445 KRT8P35-201ENST00000483942 1338 ntBASIC7.08□□□□□ -1.28
USH2AO75445 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
USH2AO75445 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
USH2AO75445 NPPA-201ENST00000376476 728 ntTSL 3 BASIC7.08□□□□□ -1.28
USH2AO75445 PGGT1BP2-201ENST00000398621 1028 ntBASIC7.08□□□□□ -1.28
USH2AO75445 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
USH2AO75445 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
USH2AO75445 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
USH2AO75445 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC7.08□□□□□ -1.28
USH2AO75445 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
USH2AO75445 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
USH2AO75445 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USH2AO75445 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USH2AO75445 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 AC026316.1-201ENST00000398900 414 ntBASIC7.07□□□□□ -1.28
USH2AO75445 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC7.07□□□□□ -1.28
USH2AO75445 ACTBP7-201ENST00000418351 1124 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms