Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMPCBO75439 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PMPCBO75439 AL603832.2-201ENST00000566195 2125 ntBASIC16.51■□□□□ 0.23
PMPCBO75439 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMPCBO75439 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.51■□□□□ 0.23
PMPCBO75439 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.51■□□□□ 0.23
PMPCBO75439 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PMPCBO75439 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMPCBO75439 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.51■□□□□ 0.23
PMPCBO75439 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PMPCBO75439 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.51■□□□□ 0.23
PMPCBO75439 GPX1P2-201ENST00000429271 606 ntBASIC16.51■□□□□ 0.23
PMPCBO75439 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.51■□□□□ 0.23
PMPCBO75439 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.51■□□□□ 0.23
PMPCBO75439 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.51■□□□□ 0.23
PMPCBO75439 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.51■□□□□ 0.23
PMPCBO75439 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.51■□□□□ 0.23
PMPCBO75439 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.51■□□□□ 0.23
PMPCBO75439 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PMPCBO75439 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.51■□□□□ 0.23
PMPCBO75439 AC073389.1-201ENST00000595595 795 ntBASIC16.51■□□□□ 0.23
PMPCBO75439 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PMPCBO75439 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PMPCBO75439 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.51■□□□□ 0.23
PMPCBO75439 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PMPCBO75439 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PMPCBO75439 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.51■□□□□ 0.23
PMPCBO75439 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
PMPCBO75439 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PMPCBO75439 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMPCBO75439 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PMPCBO75439 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PMPCBO75439 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMPCBO75439 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.51■□□□□ 0.23
PMPCBO75439 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PMPCBO75439 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.5■□□□□ 0.23
PMPCBO75439 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PMPCBO75439 FOXO1B-201ENST00000504678 1527 ntBASIC16.5■□□□□ 0.23
PMPCBO75439 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PMPCBO75439 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PMPCBO75439 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.5■□□□□ 0.23
PMPCBO75439 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.5■□□□□ 0.23
PMPCBO75439 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.5■□□□□ 0.23
PMPCBO75439 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PMPCBO75439 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.5■□□□□ 0.23
PMPCBO75439 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.5■□□□□ 0.23
PMPCBO75439 IGHV3-62-201ENST00000520057 340 ntBASIC16.5■□□□□ 0.23
PMPCBO75439 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.5■□□□□ 0.23
PMPCBO75439 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.5■□□□□ 0.23
PMPCBO75439 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.5■□□□□ 0.23
PMPCBO75439 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.5■□□□□ 0.23
PMPCBO75439 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.5■□□□□ 0.23
PMPCBO75439 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 PAUPAR-201ENST00000630360 2965 ntBASIC16.5■□□□□ 0.23
PMPCBO75439 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.5■□□□□ 0.23
PMPCBO75439 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.5■□□□□ 0.23
PMPCBO75439 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PMPCBO75439 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PMPCBO75439 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PMPCBO75439 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 AP003680.1-201ENST00000598970 3660 ntBASIC16.5■□□□□ 0.23
PMPCBO75439 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PMPCBO75439 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.5■□□□□ 0.23
PMPCBO75439 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMPCBO75439 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PMPCBO75439 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.5■□□□□ 0.23
PMPCBO75439 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.49■□□□□ 0.23
PMPCBO75439 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.49■□□□□ 0.23
PMPCBO75439 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PMPCBO75439 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.49■□□□□ 0.23
PMPCBO75439 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.49■□□□□ 0.23
PMPCBO75439 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PMPCBO75439 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMPCBO75439 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PMPCBO75439 RPSAP43-201ENST00000402237 625 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms