Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.1■□□□□ 0.81
CACNA1FO60840 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.1■□□□□ 0.81
CACNA1FO60840 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.1■□□□□ 0.81
CACNA1FO60840 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CACNA1FO60840 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CACNA1FO60840 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CACNA1FO60840 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.1■□□□□ 0.81
CACNA1FO60840 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CACNA1FO60840 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CACNA1FO60840 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
CACNA1FO60840 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.1■□□□□ 0.81
CACNA1FO60840 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CACNA1FO60840 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CACNA1FO60840 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CACNA1FO60840 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CACNA1FO60840 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.1■□□□□ 0.81
CACNA1FO60840 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.1■□□□□ 0.81
CACNA1FO60840 AC036164.1-201ENST00000570544 333 ntBASIC20.1■□□□□ 0.81
CACNA1FO60840 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.1■□□□□ 0.81
CACNA1FO60840 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CACNA1FO60840 MIR4745-201ENST00000577608 62 ntBASIC20.1■□□□□ 0.81
CACNA1FO60840 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.1■□□□□ 0.81
CACNA1FO60840 CHCHD2P3-201ENST00000603038 451 ntBASIC20.1■□□□□ 0.81
CACNA1FO60840 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CACNA1FO60840 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.1■□□□□ 0.81
CACNA1FO60840 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CACNA1FO60840 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.1■□□□□ 0.81
CACNA1FO60840 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.09■□□□□ 0.81
CACNA1FO60840 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
CACNA1FO60840 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.09■□□□□ 0.81
CACNA1FO60840 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.09■□□□□ 0.81
CACNA1FO60840 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.09■□□□□ 0.81
CACNA1FO60840 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNA1FO60840 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNA1FO60840 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNA1FO60840 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNA1FO60840 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.09■□□□□ 0.81
CACNA1FO60840 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.09■□□□□ 0.81
CACNA1FO60840 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.09■□□□□ 0.81
CACNA1FO60840 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.09■□□□□ 0.81
CACNA1FO60840 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.09■□□□□ 0.81
CACNA1FO60840 AL049840.4-201ENST00000602422 811 ntBASIC20.09■□□□□ 0.81
CACNA1FO60840 LINC02084-201ENST00000606069 1096 ntBASIC20.09■□□□□ 0.81
CACNA1FO60840 AC004233.3-201ENST00000607794 1269 ntBASIC20.09■□□□□ 0.81
CACNA1FO60840 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CACNA1FO60840 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.09■□□□□ 0.81
CACNA1FO60840 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNA1FO60840 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNA1FO60840 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.09■□□□□ 0.81
CACNA1FO60840 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNA1FO60840 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.09■□□□□ 0.81
CACNA1FO60840 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNA1FO60840 AC010491.1-201ENST00000563101 2797 ntBASIC20.09■□□□□ 0.81
CACNA1FO60840 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.09■□□□□ 0.81
CACNA1FO60840 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CACNA1FO60840 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CACNA1FO60840 OSM-203ENST00000403463 464 ntTSL 3 BASIC20.08■□□□□ 0.81
CACNA1FO60840 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.08■□□□□ 0.81
CACNA1FO60840 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CACNA1FO60840 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.08■□□□□ 0.81
CACNA1FO60840 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.08■□□□□ 0.81
CACNA1FO60840 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.08■□□□□ 0.81
CACNA1FO60840 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.08■□□□□ 0.81
CACNA1FO60840 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CACNA1FO60840 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.08■□□□□ 0.81
CACNA1FO60840 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CACNA1FO60840 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CACNA1FO60840 AC018695.7-201ENST00000624587 2492 ntBASIC20.08■□□□□ 0.81
CACNA1FO60840 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
CACNA1FO60840 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.08■□□□□ 0.8
CACNA1FO60840 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CACNA1FO60840 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.08■□□□□ 0.8
CACNA1FO60840 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CACNA1FO60840 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CACNA1FO60840 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CACNA1FO60840 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CACNA1FO60840 RN7SL837P-201ENST00000463010 287 ntBASIC20.08■□□□□ 0.8
CACNA1FO60840 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.08■□□□□ 0.8
CACNA1FO60840 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.08■□□□□ 0.8
CACNA1FO60840 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CACNA1FO60840 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.08■□□□□ 0.8
CACNA1FO60840 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CACNA1FO60840 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CACNA1FO60840 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CACNA1FO60840 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CACNA1FO60840 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.07■□□□□ 0.8
CACNA1FO60840 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.07■□□□□ 0.8
CACNA1FO60840 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CACNA1FO60840 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.07■□□□□ 0.8
CACNA1FO60840 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms