Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.17□□□□□ -0.14
XRCC2O43543 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.17□□□□□ -0.14
XRCC2O43543 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.17□□□□□ -0.14
XRCC2O43543 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.17□□□□□ -0.14
XRCC2O43543 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.17□□□□□ -0.14
XRCC2O43543 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.17□□□□□ -0.14
XRCC2O43543 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.17□□□□□ -0.14
XRCC2O43543 AL365330.1-201ENST00000607459 531 ntBASIC14.17□□□□□ -0.14
XRCC2O43543 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.17□□□□□ -0.14
XRCC2O43543 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.17□□□□□ -0.14
XRCC2O43543 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
XRCC2O43543 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.17□□□□□ -0.14
XRCC2O43543 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
XRCC2O43543 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
XRCC2O43543 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
XRCC2O43543 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
XRCC2O43543 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
XRCC2O43543 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.16□□□□□ -0.14
XRCC2O43543 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.16□□□□□ -0.14
XRCC2O43543 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.16□□□□□ -0.14
XRCC2O43543 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.16□□□□□ -0.14
XRCC2O43543 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
XRCC2O43543 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 SLC25A1P1-201ENST00000528351 927 ntBASIC14.16□□□□□ -0.14
XRCC2O43543 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.16□□□□□ -0.14
XRCC2O43543 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
XRCC2O43543 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 AC105917.1-201ENST00000506637 2539 ntBASIC14.16□□□□□ -0.14
XRCC2O43543 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 AC068587.6-202ENST00000641839 5619 ntBASIC14.16□□□□□ -0.14
XRCC2O43543 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.16□□□□□ -0.14
XRCC2O43543 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
XRCC2O43543 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XRCC2O43543 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
XRCC2O43543 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.15□□□□□ -0.14
XRCC2O43543 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.15□□□□□ -0.14
XRCC2O43543 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.15□□□□□ -0.14
XRCC2O43543 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.15□□□□□ -0.14
XRCC2O43543 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
XRCC2O43543 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.15□□□□□ -0.14
XRCC2O43543 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
XRCC2O43543 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
XRCC2O43543 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
XRCC2O43543 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.15□□□□□ -0.14
XRCC2O43543 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.15□□□□□ -0.14
XRCC2O43543 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.15□□□□□ -0.14
XRCC2O43543 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.15□□□□□ -0.14
XRCC2O43543 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.15□□□□□ -0.14
XRCC2O43543 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 AP002472.1-201ENST00000577490 586 ntBASIC14.15□□□□□ -0.14
XRCC2O43543 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XRCC2O43543 AL513190.1-201ENST00000621254 727 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms