Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.11□□□□□ -0.15
PHF1O43189 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.11□□□□□ -0.15
PHF1O43189 RHOQP3-201ENST00000437982 621 ntBASIC14.11□□□□□ -0.15
PHF1O43189 FAM185BP-201ENST00000443595 716 ntBASIC14.11□□□□□ -0.15
PHF1O43189 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.11□□□□□ -0.15
PHF1O43189 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.11□□□□□ -0.15
PHF1O43189 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 AC091812.2-201ENST00000619081 385 ntBASIC14.11□□□□□ -0.15
PHF1O43189 LINC00628-201ENST00000628516 1289 ntBASIC14.11□□□□□ -0.15
PHF1O43189 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 AC007064.4-201ENST00000637740 555 ntBASIC14.11□□□□□ -0.15
PHF1O43189 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 ALOX12P2-203ENST00000570921 1945 ntBASIC14.11□□□□□ -0.15
PHF1O43189 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
PHF1O43189 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.11□□□□□ -0.15
PHF1O43189 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PHF1O43189 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PHF1O43189 AC129492.6-201ENST00000611383 1305 ntBASIC14.11□□□□□ -0.15
PHF1O43189 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PHF1O43189 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
PHF1O43189 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.1□□□□□ -0.15
PHF1O43189 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.1□□□□□ -0.15
PHF1O43189 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
PHF1O43189 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.1□□□□□ -0.15
PHF1O43189 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.1□□□□□ -0.15
PHF1O43189 AC023141.5-201ENST00000458585 616 ntBASIC14.1□□□□□ -0.15
PHF1O43189 AC074386.1-202ENST00000463561 864 ntBASIC14.1□□□□□ -0.15
PHF1O43189 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.1□□□□□ -0.15
PHF1O43189 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.1□□□□□ -0.15
PHF1O43189 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 AC093520.2-201ENST00000561830 333 ntBASIC14.1□□□□□ -0.15
PHF1O43189 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 ACTL9-202ENST00000612068 1252 ntBASIC14.1□□□□□ -0.15
PHF1O43189 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.1□□□□□ -0.15
PHF1O43189 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PHF1O43189 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
PHF1O43189 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.1□□□□□ -0.15
PHF1O43189 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.1□□□□□ -0.15
PHF1O43189 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PHF1O43189 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PHF1O43189 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PHF1O43189 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.1□□□□□ -0.15
PHF1O43189 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PHF1O43189 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.09□□□□□ -0.15
PHF1O43189 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 AL645728.1-201ENST00000366221 2101 ntBASIC14.09□□□□□ -0.15
PHF1O43189 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 AC105917.1-201ENST00000506637 2539 ntBASIC14.09□□□□□ -0.15
PHF1O43189 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
PHF1O43189 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.09□□□□□ -0.15
PHF1O43189 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PHF1O43189 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms