Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ABCC4O15439 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ABCC4O15439 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
ABCC4O15439 AC022188.1-201ENST00000620960 1664 ntBASIC20.52■□□□□ 0.87
ABCC4O15439 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
ABCC4O15439 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.52■□□□□ 0.87
ABCC4O15439 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.52■□□□□ 0.87
ABCC4O15439 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ABCC4O15439 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.52■□□□□ 0.87
ABCC4O15439 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.52■□□□□ 0.87
ABCC4O15439 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.52■□□□□ 0.87
ABCC4O15439 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ABCC4O15439 AL353705.2-201ENST00000428243 662 ntBASIC20.52■□□□□ 0.87
ABCC4O15439 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.52■□□□□ 0.87
ABCC4O15439 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.52■□□□□ 0.87
ABCC4O15439 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ABCC4O15439 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.52■□□□□ 0.87
ABCC4O15439 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.52■□□□□ 0.87
ABCC4O15439 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
ABCC4O15439 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.52■□□□□ 0.87
ABCC4O15439 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ABCC4O15439 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCC4O15439 AL035456.1-201ENST00000456064 1369 ntBASIC20.51■□□□□ 0.87
ABCC4O15439 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCC4O15439 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCC4O15439 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
ABCC4O15439 RPL37AP1-201ENST00000412502 279 ntBASIC20.51■□□□□ 0.87
ABCC4O15439 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ABCC4O15439 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.51■□□□□ 0.87
ABCC4O15439 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ABCC4O15439 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCC4O15439 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ABCC4O15439 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
ABCC4O15439 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCC4O15439 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCC4O15439 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCC4O15439 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCC4O15439 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCC4O15439 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCC4O15439 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.5■□□□□ 0.87
ABCC4O15439 AL136982.4-201ENST00000437689 1740 ntBASIC20.5■□□□□ 0.87
ABCC4O15439 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.5■□□□□ 0.87
ABCC4O15439 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCC4O15439 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 MTND6P24-201ENST00000440466 518 ntBASIC20.5■□□□□ 0.87
ABCC4O15439 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ABCC4O15439 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCC4O15439 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.5■□□□□ 0.87
ABCC4O15439 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.5■□□□□ 0.87
ABCC4O15439 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCC4O15439 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCC4O15439 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.5■□□□□ 0.87
ABCC4O15439 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ABCC4O15439 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCC4O15439 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 AC087499.5-201ENST00000452760 1342 ntBASIC20.49■□□□□ 0.87
ABCC4O15439 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCC4O15439 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
ABCC4O15439 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 CETN4P-206ENST00000642099 2168 ntBASIC20.49■□□□□ 0.87
ABCC4O15439 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.49■□□□□ 0.87
ABCC4O15439 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.49■□□□□ 0.87
ABCC4O15439 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 AP001282.1-201ENST00000531301 1499 ntBASIC20.49■□□□□ 0.87
ABCC4O15439 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.49■□□□□ 0.87
ABCC4O15439 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ABCC4O15439 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.49■□□□□ 0.87
ABCC4O15439 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms