Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
FOXN1O15353 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.32■□□□□ 0.68
FOXN1O15353 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
FOXN1O15353 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.32■□□□□ 0.68
FOXN1O15353 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FOXN1O15353 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FOXN1O15353 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN1O15353 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN1O15353 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN1O15353 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN1O15353 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 PCDHB17P-201ENST00000539533 2393 ntBASIC19.31■□□□□ 0.68
FOXN1O15353 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
FOXN1O15353 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.31■□□□□ 0.68
FOXN1O15353 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN1O15353 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN1O15353 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXN1O15353 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
FOXN1O15353 AC114501.2-201ENST00000439631 535 ntBASIC19.31■□□□□ 0.68
FOXN1O15353 FO681548.1-201ENST00000455617 1132 ntBASIC19.31■□□□□ 0.68
FOXN1O15353 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
FOXN1O15353 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.31■□□□□ 0.68
FOXN1O15353 KRT18P34-201ENST00000488218 1270 ntBASIC19.31■□□□□ 0.68
FOXN1O15353 AL512361.1-201ENST00000554200 418 ntBASIC19.31■□□□□ 0.68
FOXN1O15353 AL079307.3-201ENST00000556114 283 ntBASIC19.31■□□□□ 0.68
FOXN1O15353 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.31■□□□□ 0.68
FOXN1O15353 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.31■□□□□ 0.68
FOXN1O15353 AC010319.3-201ENST00000597028 470 ntBASIC19.31■□□□□ 0.68
FOXN1O15353 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.31■□□□□ 0.68
FOXN1O15353 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXN1O15353 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXN1O15353 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
FOXN1O15353 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
FOXN1O15353 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXN1O15353 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FOXN1O15353 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.31■□□□□ 0.68
FOXN1O15353 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXN1O15353 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXN1O15353 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
FOXN1O15353 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXN1O15353 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
FOXN1O15353 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.3■□□□□ 0.68
FOXN1O15353 MEP1AP4-201ENST00000423244 1087 ntBASIC19.3■□□□□ 0.68
FOXN1O15353 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.3■□□□□ 0.68
FOXN1O15353 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 AP001889.1-201ENST00000525414 633 ntBASIC19.3■□□□□ 0.68
FOXN1O15353 HNRNPUP1-201ENST00000554987 333 ntBASIC19.3■□□□□ 0.68
FOXN1O15353 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.3■□□□□ 0.68
FOXN1O15353 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.3■□□□□ 0.68
FOXN1O15353 MIR5572-201ENST00000583188 137 ntBASIC19.3■□□□□ 0.68
FOXN1O15353 AC233724.13-201ENST00000598383 410 ntBASIC19.3■□□□□ 0.68
FOXN1O15353 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.3■□□□□ 0.68
FOXN1O15353 AC093726.1-201ENST00000608064 963 ntBASIC19.3■□□□□ 0.68
FOXN1O15353 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.3■□□□□ 0.68
FOXN1O15353 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXN1O15353 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
FOXN1O15353 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.3■□□□□ 0.68
FOXN1O15353 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FOXN1O15353 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
FOXN1O15353 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.29■□□□□ 0.68
FOXN1O15353 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
FOXN1O15353 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 PCDH8P1-201ENST00000428983 2773 ntBASIC19.29■□□□□ 0.68
FOXN1O15353 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXN1O15353 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
FOXN1O15353 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms