Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 SPDYE7P-202ENST00000420373 878 ntBASIC15.55■□□□□ 0.08
PCDH17O14917 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDH17O14917 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDH17O14917 CNN2P2-201ENST00000443536 909 ntBASIC15.55■□□□□ 0.08
PCDH17O14917 CNN2P3-201ENST00000450201 906 ntBASIC15.55■□□□□ 0.08
PCDH17O14917 HLA-J-202ENST00000469281 1241 ntBASIC15.55■□□□□ 0.08
PCDH17O14917 AC105233.2-201ENST00000523697 349 ntBASIC15.55■□□□□ 0.08
PCDH17O14917 AF228730.5-201ENST00000530288 346 ntBASIC15.55■□□□□ 0.08
PCDH17O14917 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDH17O14917 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.55■□□□□ 0.08
PCDH17O14917 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.55■□□□□ 0.08
PCDH17O14917 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDH17O14917 AL136317.3-201ENST00000618497 906 ntBASIC15.55■□□□□ 0.08
PCDH17O14917 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
PCDH17O14917 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDH17O14917 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDH17O14917 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDH17O14917 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDH17O14917 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDH17O14917 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDH17O14917 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH17O14917 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH17O14917 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH17O14917 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.54■□□□□ 0.08
PCDH17O14917 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PCDH17O14917 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PCDH17O14917 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 MIR346-201ENST00000362234 95 ntBASIC15.54■□□□□ 0.08
PCDH17O14917 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH17O14917 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH17O14917 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDH17O14917 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH17O14917 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDH17O14917 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH17O14917 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH17O14917 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.54■□□□□ 0.08
PCDH17O14917 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH17O14917 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH17O14917 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PCDH17O14917 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH17O14917 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
PCDH17O14917 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH17O14917 AC016027.1-202ENST00000607927 1699 ntBASIC15.54■□□□□ 0.08
PCDH17O14917 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH17O14917 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH17O14917 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH17O14917 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH17O14917 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH17O14917 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH17O14917 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PCDH17O14917 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH17O14917 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH17O14917 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH17O14917 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDH17O14917 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDH17O14917 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH17O14917 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH17O14917 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms