Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3B1O00203 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
AP3B1O00203 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3B1O00203 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3B1O00203 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
AP3B1O00203 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3B1O00203 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3B1O00203 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3B1O00203 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3B1O00203 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AP3B1O00203 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3B1O00203 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.43■□□□□ 0.22
AP3B1O00203 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.43■□□□□ 0.22
AP3B1O00203 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3B1O00203 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3B1O00203 FDX1P1-201ENST00000449115 551 ntBASIC16.43■□□□□ 0.22
AP3B1O00203 AC098859.1-201ENST00000502915 1238 ntBASIC16.43■□□□□ 0.22
AP3B1O00203 FAM86C2P-203ENST00000528684 1004 ntBASIC16.43■□□□□ 0.22
AP3B1O00203 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.43■□□□□ 0.22
AP3B1O00203 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
AP3B1O00203 RARRES2P8-201ENST00000566335 367 ntBASIC16.43■□□□□ 0.22
AP3B1O00203 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 AC073389.1-201ENST00000595595 795 ntBASIC16.43■□□□□ 0.22
AP3B1O00203 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.43■□□□□ 0.22
AP3B1O00203 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 FLJ16779-201ENST00000612722 7638 ntBASIC16.43■□□□□ 0.22
AP3B1O00203 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
AP3B1O00203 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP3B1O00203 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
AP3B1O00203 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.42■□□□□ 0.22
AP3B1O00203 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
AP3B1O00203 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
AP3B1O00203 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.42■□□□□ 0.22
AP3B1O00203 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.42■□□□□ 0.22
AP3B1O00203 AC106730.1-201ENST00000566722 1090 ntBASIC16.42■□□□□ 0.22
AP3B1O00203 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
AP3B1O00203 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
AP3B1O00203 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.42■□□□□ 0.22
AP3B1O00203 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP3B1O00203 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.42■□□□□ 0.22
AP3B1O00203 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
AP3B1O00203 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
AP3B1O00203 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
AP3B1O00203 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
AP3B1O00203 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.41■□□□□ 0.22
AP3B1O00203 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
AP3B1O00203 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
AP3B1O00203 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.41■□□□□ 0.22
AP3B1O00203 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.41■□□□□ 0.22
AP3B1O00203 KRT18P3-201ENST00000451602 1288 ntBASIC16.41■□□□□ 0.22
AP3B1O00203 AC105233.2-201ENST00000523697 349 ntBASIC16.41■□□□□ 0.22
AP3B1O00203 AF228730.5-201ENST00000530288 346 ntBASIC16.41■□□□□ 0.22
AP3B1O00203 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.41■□□□□ 0.22
AP3B1O00203 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.41■□□□□ 0.22
AP3B1O00203 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.41■□□□□ 0.22
AP3B1O00203 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.41■□□□□ 0.22
AP3B1O00203 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
AP3B1O00203 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.41■□□□□ 0.22
AP3B1O00203 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.41■□□□□ 0.22
AP3B1O00203 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3B1O00203 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms