Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 CES1P1-201ENST00000421606 1704 ntBASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 BET1L-204ENST00000410108 637 ntTSL 3 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 BRI3-207ENST00000539286 699 ntTSL 2 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 MTHFR-217ENST00000641820 1569 ntBASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 AC046185.3-201ENST00000623228 1824 ntBASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CHKB-CPT1BH3BT56 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 GSN-215ENST00000545652 2428 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 AL109659.2-201ENST00000606809 1674 ntBASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 SDHAP2-201ENST00000455183 2001 ntBASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ASL-204ENST00000395331 1538 ntTSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 AL512791.2-201ENST00000615251 4609 ntBASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 LSM12P1-201ENST00000411836 588 ntBASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 AP002490.2-201ENST00000524791 560 ntBASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 AC009065.1-201ENST00000564055 1225 ntBASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 AC005829.2-201ENST00000571422 1056 ntBASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 MAG-206ENST00000597035 542 ntTSL 4 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CHKB-CPT1BH3BT56 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms