Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 MIR648-201ENST00000385046 94 ntBASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 MIR770-201ENST00000390219 98 ntBASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 AL080243.2-201ENST00000418783 582 ntBASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 IGHV3-42-201ENST00000520410 361 ntBASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 AC134407.2-201ENST00000625089 1978 ntBASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
YJEFN3A6XGL0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 SPDYE17-201ENST00000412399 783 ntBASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 AL390754.1-201ENST00000619088 582 ntBASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.86■□□□□ 0.29
YJEFN3A6XGL0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 BNIP3P1-202ENST00000550043 1585 ntBASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 TEX28P1-201ENST00000613479 1221 ntBASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 TEX28P2-201ENST00000617764 1221 ntBASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
YJEFN3A6XGL0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.84■□□□□ 0.29
YJEFN3A6XGL0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms