Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 RPL13P2-201ENST00000440687 659 ntBASIC14.15□□□□□ -0.14
MBD3L3A6NE82 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 INE1-201ENST00000456273 945 ntBASIC14.15□□□□□ -0.14
MBD3L3A6NE82 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 LINC01115-203ENST00000606068 577 ntBASIC14.15□□□□□ -0.14
MBD3L3A6NE82 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.15□□□□□ -0.14
MBD3L3A6NE82 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
MBD3L3A6NE82 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
MBD3L3A6NE82 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 AL512384.1-201ENST00000406683 331 ntBASIC14.14□□□□□ -0.15
MBD3L3A6NE82 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 ELK1P1-201ENST00000485699 580 ntBASIC14.14□□□□□ -0.15
MBD3L3A6NE82 GIMAP3P-201ENST00000495150 836 ntBASIC14.14□□□□□ -0.15
MBD3L3A6NE82 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 AD000864.1-201ENST00000624076 2295 ntBASIC14.14□□□□□ -0.15
MBD3L3A6NE82 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 AC011676.5-201ENST00000624864 2660 ntBASIC14.14□□□□□ -0.15
MBD3L3A6NE82 OR6D1P-203ENST00000641209 4860 ntBASIC14.14□□□□□ -0.15
MBD3L3A6NE82 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
MBD3L3A6NE82 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 OR8S1-201ENST00000310194 1080 ntBASIC14.13□□□□□ -0.15
MBD3L3A6NE82 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.13□□□□□ -0.15
MBD3L3A6NE82 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms