Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 SLC25A6P4-201ENST00000586535 553 ntBASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 MIR4321-201ENST00000592276 80 ntBASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDHA3Q9Y5H8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 AC025580.3-201ENST00000617932 1424 ntBASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 AP003680.1-201ENST00000598970 3660 ntBASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 Z83851.2-201ENST00000609564 659 ntBASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 AC004877.2-201ENST00000623941 599 ntBASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHA3Q9Y5H8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHA3Q9Y5H8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDHA3Q9Y5H8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PCDHA3Q9Y5H8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.96■□□□□ 0.3
PCDHA3Q9Y5H8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHA3Q9Y5H8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 GPX1P2-201ENST00000429271 606 ntBASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHA3Q9Y5H8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms