Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSX2IPQ9Y2D8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 BTBD7P1-201ENST00000447253 1453 ntBASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.48■□□□□ 0.39
SSX2IPQ9Y2D8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 RPL37AP1-201ENST00000412502 279 ntBASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 AL671710.1-201ENST00000610245 2349 ntBASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SSX2IPQ9Y2D8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 NME2P1-201ENST00000426182 414 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms