Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 AC099522.2-201ENST00000607001 744 ntBASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VPS9D1Q9Y2B5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
VPS9D1Q9Y2B5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VPS9D1Q9Y2B5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
VPS9D1Q9Y2B5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS9D1Q9Y2B5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.21■□□□□ 0.18
VPS9D1Q9Y2B5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.21■□□□□ 0.18
VPS9D1Q9Y2B5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS9D1Q9Y2B5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VPS9D1Q9Y2B5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 AC024909.3-201ENST00000611513 2257 ntBASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 HAUS4P1-201ENST00000406739 1145 ntBASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 ACTG1P14-201ENST00000446382 1122 ntBASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 AC105233.2-201ENST00000523697 349 ntBASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 AF228730.5-201ENST00000530288 346 ntBASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 AC073389.1-201ENST00000595595 795 ntBASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 AC091812.2-201ENST00000619081 385 ntBASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VPS9D1Q9Y2B5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
VPS9D1Q9Y2B5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms