Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 BX664615.1-201ENST00000443558 458 ntBASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 AC145285.6-201ENST00000604632 637 ntBASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 AC139887.4-201ENST00000607877 719 ntBASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 AC041040.2-201ENST00000622926 2899 ntBASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ERGIC3Q9Y282 SNX33P1-201ENST00000592116 1762 ntBASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 AC243591.1-201ENST00000452967 1364 ntBASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 AC005912.2-201ENST00000619492 2400 ntBASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 AL845331.1-201ENST00000424978 1190 ntBASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 AC246785.2-201ENST00000432512 513 ntBASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 AC010203.1-204ENST00000548782 407 ntBASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 TERC-201ENST00000602385 541 ntBASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ERGIC3Q9Y282 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERGIC3Q9Y282 AC069224.1-201ENST00000566372 1715 ntBASIC14.89□□□□□ -0.03
ERGIC3Q9Y282 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERGIC3Q9Y282 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERGIC3Q9Y282 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
ERGIC3Q9Y282 TOP3BP1-201ENST00000420768 1380 ntBASIC14.89□□□□□ -0.03
ERGIC3Q9Y282 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ERGIC3Q9Y282 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms