Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DUX4Q9UBX2 HLA-A-201ENST00000376802 1334 ntBASIC14.4□□□□□ -0.1
DUX4Q9UBX2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
DUX4Q9UBX2 ST20-AS1-201ENST00000560255 4223 ntBASIC14.39□□□□□ -0.11
DUX4Q9UBX2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AC006504.4-201ENST00000592118 1568 ntBASIC14.39□□□□□ -0.11
DUX4Q9UBX2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AP002414.3-201ENST00000589352 1468 ntBASIC14.39□□□□□ -0.11
DUX4Q9UBX2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AC079776.4-201ENST00000511039 504 ntBASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.39□□□□□ -0.11
DUX4Q9UBX2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 NCF1C-201ENST00000438382 1427 ntBASIC14.39□□□□□ -0.11
DUX4Q9UBX2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
DUX4Q9UBX2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 AC079328.2-201ENST00000561241 3354 ntBASIC14.38□□□□□ -0.11
DUX4Q9UBX2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 AC139887.3-201ENST00000568585 713 ntBASIC14.38□□□□□ -0.11
DUX4Q9UBX2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 AL353135.1-201ENST00000606729 504 ntBASIC14.38□□□□□ -0.11
DUX4Q9UBX2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.38□□□□□ -0.11
DUX4Q9UBX2 AL589182.2-201ENST00000619332 1049 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms