Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 RPSAP52-203ENST00000622976 1023 ntBASIC16.06■□□□□ 0.16
NCDNQ9UBB6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCDNQ9UBB6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 LINC00304-203ENST00000565008 1864 ntBASIC16.05■□□□□ 0.16
NCDNQ9UBB6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 OR6D1P-203ENST00000641209 4860 ntBASIC16.05■□□□□ 0.16
NCDNQ9UBB6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 ACTG1P3-201ENST00000431775 1114 ntBASIC16.05■□□□□ 0.16
NCDNQ9UBB6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 AL118558.3-201ENST00000607414 1079 ntBASIC16.05■□□□□ 0.16
NCDNQ9UBB6 AL021578.1-201ENST00000613646 709 ntBASIC16.05■□□□□ 0.16
NCDNQ9UBB6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCDNQ9UBB6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 PCDHA12-202ENST00000613593 2588 ntBASIC16.04■□□□□ 0.16
NCDNQ9UBB6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 AC006033.1-201ENST00000440505 426 ntBASIC16.04■□□□□ 0.16
NCDNQ9UBB6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.04■□□□□ 0.16
NCDNQ9UBB6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 335.5 ms