Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 AP000867.4-201ENST00000641616 219 ntBASIC15.81■□□□□ 0.12
NDE1Q9NXR1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDE1Q9NXR1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 AC092647.4-201ENST00000457211 535 ntBASIC15.8■□□□□ 0.12
NDE1Q9NXR1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.8■□□□□ 0.12
NDE1Q9NXR1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 SPDYE13P-201ENST00000445314 798 ntBASIC15.79■□□□□ 0.12
NDE1Q9NXR1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 AL353135.1-201ENST00000606729 504 ntBASIC15.79■□□□□ 0.12
NDE1Q9NXR1 AC010331.1-201ENST00000611423 582 ntBASIC15.79■□□□□ 0.12
NDE1Q9NXR1 AC073592.4-201ENST00000623827 446 ntBASIC15.79■□□□□ 0.12
NDE1Q9NXR1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 LINC01101-201ENST00000622953 1884 ntBASIC15.79■□□□□ 0.12
NDE1Q9NXR1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 AC131009.4-201ENST00000624048 1740 ntBASIC15.79■□□□□ 0.12
NDE1Q9NXR1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.79■□□□□ 0.12
NDE1Q9NXR1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 AL592424.1-201ENST00000563624 1536 ntBASIC15.78■□□□□ 0.12
NDE1Q9NXR1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDE1Q9NXR1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms