Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 AL139400.1-201ENST00000366220 510 ntBASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 CICP6-201ENST00000457191 2729 ntBASIC18■□□□□ 0.47
BLOC1S4Q9NUP1 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 AC018529.1-201ENST00000613063 361 ntBASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 AL691403.2-201ENST00000618460 490 ntBASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
BLOC1S4Q9NUP1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 AP001059.3-201ENST00000619053 235 ntBASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 CYP4F24P-201ENST00000586049 1580 ntBASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.98■□□□□ 0.47
BLOC1S4Q9NUP1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.97■□□□□ 0.47
BLOC1S4Q9NUP1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms