Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 AC002347.1-201ENST00000569543 541 ntBASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRAC1Q9NRG0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 AC091812.2-201ENST00000619081 385 ntBASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 PMS2P7-201ENST00000506558 1336 ntBASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHRAC1Q9NRG0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 RARRES2P8-201ENST00000566335 367 ntBASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 AL365330.1-201ENST00000607459 531 ntBASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CHRAC1Q9NRG0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms