Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 AL589702.1-201ENST00000641229 1509 ntBASIC16.8■□□□□ 0.28
HPS4Q9NQG7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 HLA-J-202ENST00000469281 1241 ntBASIC16.8■□□□□ 0.28
HPS4Q9NQG7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 AC104794.3-201ENST00000566840 1248 ntBASIC16.8■□□□□ 0.28
HPS4Q9NQG7 AC061975.2-201ENST00000581722 295 ntBASIC16.8■□□□□ 0.28
HPS4Q9NQG7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.8■□□□□ 0.28
HPS4Q9NQG7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AC046158.3-201ENST00000624947 2558 ntBASIC16.79■□□□□ 0.28
HPS4Q9NQG7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AL353779.1-201ENST00000434793 351 ntBASIC16.79■□□□□ 0.28
HPS4Q9NQG7 RN7SL618P-201ENST00000477850 296 ntBASIC16.79■□□□□ 0.28
HPS4Q9NQG7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AP002490.2-201ENST00000524791 560 ntBASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AC020765.3-201ENST00000613051 740 ntBASIC16.79■□□□□ 0.28
HPS4Q9NQG7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 AL031731.1-201ENST00000642131 2094 ntBASIC16.79■□□□□ 0.28
HPS4Q9NQG7 GPAA1P2-202ENST00000606848 1787 ntBASIC16.79■□□□□ 0.28
HPS4Q9NQG7 BTBD7P1-201ENST00000447253 1453 ntBASIC16.79■□□□□ 0.28
HPS4Q9NQG7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS4Q9NQG7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms