Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF2Q9HAU5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.02■□□□□ 0.8
UPF2Q9HAU5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 PTCHD3P3-201ENST00000403073 906 ntBASIC20.02■□□□□ 0.8
UPF2Q9HAU5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 RBM17P3-201ENST00000417687 1192 ntBASIC20.02■□□□□ 0.8
UPF2Q9HAU5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 IER3-202ENST00000376377 1350 ntBASIC20.02■□□□□ 0.8
UPF2Q9HAU5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UPF2Q9HAU5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
UPF2Q9HAU5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UPF2Q9HAU5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UPF2Q9HAU5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
UPF2Q9HAU5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UPF2Q9HAU5 AC092919.2-201ENST00000623631 1645 ntBASIC20.02■□□□□ 0.79
UPF2Q9HAU5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
UPF2Q9HAU5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 SLC25A6P2-201ENST00000497974 877 ntBASIC20.01■□□□□ 0.79
UPF2Q9HAU5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.01■□□□□ 0.79
UPF2Q9HAU5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 U82695.1-201ENST00000635752 1889 ntBASIC20.01■□□□□ 0.79
UPF2Q9HAU5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF2Q9HAU5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20■□□□□ 0.79
UPF2Q9HAU5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20■□□□□ 0.79
UPF2Q9HAU5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20■□□□□ 0.79
UPF2Q9HAU5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC20■□□□□ 0.79
UPF2Q9HAU5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20■□□□□ 0.79
UPF2Q9HAU5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20■□□□□ 0.79
UPF2Q9HAU5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20■□□□□ 0.79
UPF2Q9HAU5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20■□□□□ 0.79
UPF2Q9HAU5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20■□□□□ 0.79
UPF2Q9HAU5 AC004706.3-202ENST00000621574 984 ntBASIC20■□□□□ 0.79
UPF2Q9HAU5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20■□□□□ 0.79
UPF2Q9HAU5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC20■□□□□ 0.79
UPF2Q9HAU5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20■□□□□ 0.79
UPF2Q9HAU5 TNRC18P2-201ENST00000417666 2714 ntBASIC20■□□□□ 0.79
UPF2Q9HAU5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UPF2Q9HAU5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms