Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRC40Q9H9A6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 AKAP8P1-201ENST00000434743 1349 ntBASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 AP005117.1-202ENST00000581724 1908 ntBASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 HAUS4P1-201ENST00000406739 1145 ntBASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 AC091812.2-201ENST00000619081 385 ntBASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LRRC40Q9H9A6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 NFIC-211ENST00000641145 8399 ntBASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 AC023274.1-201ENST00000418278 595 ntBASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 AC040169.1-201ENST00000565382 521 ntBASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 AC008677.1-201ENST00000519230 1561 ntBASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRC40Q9H9A6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC40Q9H9A6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms