Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCAF1Q9H7N4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 AL355306.1-201ENST00000415580 579 ntBASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 AC092658.1-201ENST00000505836 891 ntBASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 TNRC18P2-201ENST00000417666 2714 ntBASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
SCAF1Q9H7N4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AC122714.2-201ENST00000502787 707 ntBASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AC010460.3-201ENST00000511359 1579 ntBASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 AC008677.1-201ENST00000519230 1561 ntBASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCAF1Q9H7N4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms