Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 AP001282.1-201ENST00000531301 1499 ntBASIC19.11■□□□□ 0.65
RNF41Q9H4P4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 MTND6P24-201ENST00000440466 518 ntBASIC19.11■□□□□ 0.65
RNF41Q9H4P4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 AC069120.2-201ENST00000524091 540 ntBASIC19.11■□□□□ 0.65
RNF41Q9H4P4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF41Q9H4P4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 AL691432.1-201ENST00000596308 1422 ntBASIC19.1■□□□□ 0.65
RNF41Q9H4P4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 CYMP-203ENST00000474680 1263 ntBASIC19.1■□□□□ 0.65
RNF41Q9H4P4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 AC027796.2-201ENST00000575326 344 ntBASIC19.1■□□□□ 0.65
RNF41Q9H4P4 AL158211.3-201ENST00000607385 239 ntBASIC19.1■□□□□ 0.65
RNF41Q9H4P4 AL133215.2-201ENST00000609242 977 ntBASIC19.1■□□□□ 0.65
RNF41Q9H4P4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
RNF41Q9H4P4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 CETN4P-206ENST00000642099 2168 ntBASIC19.09■□□□□ 0.65
RNF41Q9H4P4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 AC004987.2-201ENST00000395959 1148 ntBASIC19.09■□□□□ 0.65
RNF41Q9H4P4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 HLA-V-204ENST00000476601 1289 ntBASIC19.09■□□□□ 0.65
RNF41Q9H4P4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 AC093512.1-201ENST00000617969 520 ntBASIC19.09■□□□□ 0.65
RNF41Q9H4P4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF41Q9H4P4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
RNF41Q9H4P4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF41Q9H4P4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF41Q9H4P4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms